DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpLP0-like and MRT4

DIOPT Version :9

Sequence 1:	NP_610554.1	Gene:	RpLP0-like / 36058	FlyBaseID:	FBgn0033485	Length:	256	Species:	Drosophila melanogaster
Sequence 2:	NP_012916.1	Gene:	MRT4 / 853860	SGDID:	S000001492	Length:	236	Species:	Saccharomyces cerevisiae

Alignment Length:	247	Identity:	84/247 - (34%)
Similarity:	135/247 - (54%)	Gaps:	24/247 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSR 65
            ||||||.|.|:|.:||:||...|:||.|::|..:..|..::|..:.::|..:|:::|... ..|:
Yeast     1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW-AGSK 64

  Fly    66 FIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF 130
            .|.||.:|:|..||..:.||.:..|::|||..:|..||||||:....|.|:.::|...:|:|...
Yeast    65 LIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNT 129

  Fly   131 VATETVTLPAG---------PLED---FAHSMEPHLRS-LGLPTKLEKGIVTLYSDYTVCEEGKV 182
            .|..|.|:|.|         |.|:   ..||:||.:|: ..:|||::.|.:|:.|.|.||.||:.
Yeast   130 KAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKITIDSPYLVCTEGEK 194

  Fly   183 LTPEQARILKLVGKPMAKFRLTMKCSWTKSEGFQLHVEDDVNDEEQADSAME 234
            |...||.|||..|...::|::.:..          :.::|.:..|..:..||
Yeast   195 LDVRQALILKQFGIAASEFKVKVSA----------YYDNDSSTVESTNINME 236

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpLP0-like	NP_610554.1	Ribosomal_P0_like	21..184	CDD:240222	59/175 (34%)
MRT4	NP_012916.1	Ribosomal_P0_like	21..196	CDD:240222	59/175 (34%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C157345163
Domainoid	1	1.000	67	1.000	Domainoid score	I2361
eggNOG	1	0.900	-	-		E1_COG0244
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6379
Inparanoid	1	1.050	134	1.000	Inparanoid score	I1219
Isobase	1	0.950	-	0	Normalized mean entropy	S682
OMA	1	1.010	-	-		QHG53665
OrthoFinder	1	1.000	-	-		FOG0004679
OrthoInspector	1	1.000	-	-		oto99777
orthoMCL	1	0.900	-	-		OOG6_102229
Panther	1	1.100	-	-	LDO	PTHR45841
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R748
SonicParanoid	1	1.000	-	-		X3287
TreeFam	1	0.960	-	-
	16	15.740