DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0-like and mrto4

DIOPT Version :9

Sequence 1:NP_610554.1 Gene:RpLP0-like / 36058 FlyBaseID:FBgn0033485 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001017657.1 Gene:mrto4 / 550350 ZFINID:ZDB-GENE-050417-142 Length:242 Species:Danio rerio


Alignment Length:260 Identity:131/260 - (50%)
Similarity:172/260 - (66%) Gaps:28/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSR 65
            ||:||||||:|||||.:|||..||.:::::|.|...|..:|||.|:||||:.|||:|... ::||
Zfish     1 MPKSKRDKKISLTKTTKKGLEAKQNLIEELRKCADIYRYVFVFSVENMRNNKLKDIRTAW-RHSR 64

  Fly    66 FIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF 130
            |.||||:||.|.||:..::|.:..|||||:.|.|:||:|||:|:|:||.|:..|:..|:|||:|.
Zfish    65 FFFGKNKVMMIALGKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFKEVDYARAGN 129

  Fly   131 VATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVG 195
            .|:..|||..|||:.|.|||||.||.|||||.|:||.|||..|:.||:||..|||||||||||.|
Zfish   130 TASMAVTLDEGPLDQFPHSMEPQLRQLGLPTALKKGAVTLIKDFEVCKEGDTLTPEQARILKLFG 194

  Fly   196 KPMAKFRLTMKCSWTKSEGFQLHVEDDVNDEEQADSAMEEEAEAEAMDDNDDDDD----EEEDDE 256
            ..||:|:|::||.|....|                       |.|.:.|.||||:    |:||.|
Zfish   195 FEMAEFKLSIKCMWNSESG-----------------------EFEKLTDGDDDDETKEAEDEDSE 236

  Fly   257  256
            Zfish   237  236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0-likeNP_610554.1 Ribosomal_P0_like 21..184 CDD:240222 84/162 (52%)
mrto4NP_001017657.1 Ribosomal_P0_like 21..183 CDD:240222 84/162 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6821
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6379
Inparanoid 1 1.050 254 1.000 Inparanoid score I3170
OMA 1 1.010 - - QHG53665
OrthoDB 1 1.010 - - D1181992at2759
OrthoFinder 1 1.000 - - FOG0004679
OrthoInspector 1 1.000 - - oto41731
orthoMCL 1 0.900 - - OOG6_102229
Panther 1 1.100 - - LDO PTHR45841
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R748
SonicParanoid 1 1.000 - - X3287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

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