DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpLP0-like and MRTO4

DIOPT Version :9

Sequence 1:NP_610554.1 Gene:RpLP0-like / 36058 FlyBaseID:FBgn0033485 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_057267.2 Gene:MRTO4 / 51154 HGNCID:18477 Length:239 Species:Homo sapiens


Alignment Length:251 Identity:132/251 - (52%)
Similarity:177/251 - (70%) Gaps:12/251 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSR 65
            ||:||||||||||||.:|||..||.:::::|.||..|..:|:|.|.|||||.|||:|... |:||
Human     1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW-KHSR 64

  Fly    66 FIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF 130
            ..||||:||.:.|||:.|:|.:..||::||||.|:||||||:::||||.||...|..::|||:|.
Human    65 MFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGN 129

  Fly   131 VATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVG 195
            .|..||:|..||||.|.|||||.||.|||||.|::|:|||.|||.||:||.||||||||:|||.|
Human   130 KAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFG 194

  Fly   196 KPMAKFRLTMKCSWTKSEGFQLHVEDDVNDEEQADSAMEEEAEAEAMDDNDDDDDE 251
            ..||:|::|:|..|....|....:.||:           .|:.:|:.:::|.:||:
Human   195 YEMAEFKVTIKYMWDSQSGRFQQMGDDL-----------PESASESTEESDSEDDD 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0-likeNP_610554.1 Ribosomal_P0_like 21..184 CDD:240222 90/162 (56%)
MRTO4NP_057267.2 Ribosomal_P0_like 21..183 CDD:240222 90/162 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..239 6/34 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 110 1.000 Domainoid score I6330
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6379
Inparanoid 1 1.050 260 1.000 Inparanoid score I3113
Isobase 1 0.950 - 0 Normalized mean entropy S682
OMA 1 1.010 - - QHG53665
OrthoDB 1 1.010 - - D1181992at2759
OrthoFinder 1 1.000 - - FOG0004679
OrthoInspector 1 1.000 - - oto90338
orthoMCL 1 0.900 - - OOG6_102229
Panther 1 1.100 - - LDO PTHR45841
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R748
SonicParanoid 1 1.000 - - X3287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

Return to query results.
Submit another query.