DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0-like and mrto4

DIOPT Version :9

Sequence 1:NP_610554.1 Gene:RpLP0-like / 36058 FlyBaseID:FBgn0033485 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001005116.1 Gene:mrto4 / 448696 XenbaseID:XB-GENE-948010 Length:240 Species:Xenopus tropicalis


Alignment Length:251 Identity:132/251 - (52%)
Similarity:177/251 - (70%) Gaps:13/251 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSR 65
            ||:||||||||||||.:|||..||.:::::|.||..|..|:|..|:||||:.|||:|... |:||
 Frog     1 MPKSKRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKYIYVLSVENMRNNKLKDVRNAW-KHSR 64

  Fly    66 FIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF 130
            ..||||:||.:.||:..|:|.:..||||||.|.|:||||||:::::||.||.:.:..:::||:|.
 Frog    65 LFFGKNKVMMVALGKGVSDEYKDNLHKLSKCLKGEVGLLFTNRTEKEVKEWFDQFKDMDFARAGN 129

  Fly   131 VATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVG 195
            .||..|.|.|||||.|.|||||.||.|||||.|:||::||.|||.||:||.||||||||||||..
 Frog   130 KATYAVVLDAGPLEQFTHSMEPQLRQLGLPTALKKGVITLLSDYEVCKEGDVLTPEQARILKLFS 194

  Fly   196 KPMAKFRLTMKCSWTKSEG-FQLHVEDDVNDEEQADSAMEEEAEAEAMDDNDDDDD 250
            ..||:|::::|..||...| ||     ...||      .||::|.|.||:.::::|
 Frog   195 FQMAEFKVSIKSIWTAETGEFQ-----KFGDE------TEEKSEEEDMDEEEENND 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0-likeNP_610554.1 Ribosomal_P0_like 21..184 CDD:240222 86/162 (53%)
mrto4NP_001005116.1 Ribosomal_P0_like 21..183 CDD:240222 86/162 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 101 1.000 Domainoid score I6855
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6379
Inparanoid 1 1.050 250 1.000 Inparanoid score I3156
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1181992at2759
OrthoFinder 1 1.000 - - FOG0004679
OrthoInspector 1 1.000 - - oto104147
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3287
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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