DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0-like and Mrto4

DIOPT Version :9

Sequence 1:NP_610554.1 Gene:RpLP0-like / 36058 FlyBaseID:FBgn0033485 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_006239240.1 Gene:Mrto4 / 298586 RGDID:1311709 Length:240 Species:Rattus norvegicus


Alignment Length:255 Identity:137/255 - (53%)
Similarity:179/255 - (70%) Gaps:16/255 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSR 65
            ||:||||||||||||.:|||..||.:::::|.||..|..:|:|.|.|||||.|||:|... |:||
  Rat     1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW-KHSR 64

  Fly    66 FIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGF 130
            ..||||:||.:.|||:.|:|.:..||::||:|.|:||||||:::||||.||...|..:::||:|.
  Rat    65 MFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGN 129

  Fly   131 VATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEGKVLTPEQARILKLVG 195
            .||.||:|..|||:.|.|||||.||.|||||.|:||:|||.|||.||:||.||||||||:|||.|
  Rat   130 KATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFG 194

  Fly   196 KPMAKFRLTMKCSWTKSEGFQLHVEDDVNDEEQADSAMEEEAEAEAMDDNDDDDDEEEDD 255
            ..||:|::|:|..|....|....::||:     .:||.|.|.|:|          |||||
  Rat   195 YEMAEFKVTIKYMWDAQSGRFQQMDDDL-----PESAPESEGESE----------EEEDD 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0-likeNP_610554.1 Ribosomal_P0_like 21..184 CDD:240222 89/162 (55%)
Mrto4XP_006239240.1 Ribosomal_P0_like 21..183 CDD:240222 89/162 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6968
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6379
Inparanoid 1 1.050 205 1.000 Inparanoid score I3663
OMA 1 1.010 - - QHG53665
OrthoDB 1 1.010 - - D1181992at2759
OrthoFinder 1 1.000 - - FOG0004679
OrthoInspector 1 1.000 - - oto97455
orthoMCL 1 0.900 - - OOG6_102229
Panther 1 1.100 - - LDO PTHR45841
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3287
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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