DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jra and jund

DIOPT Version :9

Sequence 1:NP_001260844.1 Gene:Jra / 36057 FlyBaseID:FBgn0001291 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001121814.1 Gene:jund / 564873 ZFINID:ZDB-GENE-070725-2 Length:283 Species:Danio rerio


Alignment Length:266 Identity:105/266 - (39%)
Similarity:149/266 - (56%) Gaps:44/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KRPGSLDL---NSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSNNLMQTPQPGK--VFPT 116
            |:..||:|   ||.|.|.....|..::|||||....:.:|:||::::.:|.|.|..|..  ::|.
Zfish    22 KKDMSLNLDDQNSSSLKPDLRDAEGILNSPDLGLLKLASPELERLIIQSNGMVTTTPTSQFIYPK 86

  Fly   117 KAGPVTVEQLDFGRGFEEALHNLHTNSQ--AFPSANSAANSAANNTTAAAMTA---VNNGISGGT 176
            .   |:.|| :|..||.:||.:||..:|  ..|......|..||::|:.|:.|   |...:|   
Zfish    87 S---VSDEQ-EFAEGFVKALEDLHKQNQLNGGPCVPPTLNRLANSSTSLALNADLPVYTNLS--- 144

  Fly   177 FTYTNMTEGFSV--------------------IKDEP------VNQASSPTVNPIDMEAQEKIKL 215
             ||.:.|..:|.                    :||||      .:...||.::||||:.||:||.
Zfish   145 -TYGSTTVNYSTDTIPFPPPPPAHPMSAQPQPLKDEPQTVPDMQSFGDSPPLSPIDMDTQERIKA 208

  Fly   216 ERKRQRNRVAASKCRKRKLERISKLEDRVKVLKGENVDLASIVKNLKDHVAQLKQQVMEHIAAGC 280
            |||:.|||:||||||||||||||:|||:||.||.:|.:|||....|::.||||||:||.|:..||
Zfish   209 ERKKLRNRIAASKCRKRKLERISRLEDKVKSLKSQNTELASTASVLREQVAQLKQRVMNHVNNGC 273

  Fly   281 TVPPNS 286
            .:.||:
Zfish   274 QLLPNT 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JraNP_001260844.1 Jun <76..>144 CDD:281890 24/69 (35%)
bZIP_Jun 214..274 CDD:269844 40/59 (68%)
coiled coil 215..266 CDD:269844 32/50 (64%)
jundNP_001121814.1 Jun 20..194 CDD:281890 51/179 (28%)
bZIP_Jun 207..267 CDD:269844 40/59 (68%)
coiled coil 208..259 CDD:269844 32/50 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583930
Domainoid 1 1.000 92 1.000 Domainoid score I7564
eggNOG 1 0.900 - - E1_KOG0837
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 154 1.000 Inparanoid score I4287
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1090460at2759
OrthoFinder 1 1.000 - - FOG0001331
OrthoInspector 1 1.000 - - otm25062
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11462
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4616
SonicParanoid 1 1.000 - - X1044
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.890

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