DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jra and jun-1

DIOPT Version :9

Sequence 1:NP_001260844.1 Gene:Jra / 36057 FlyBaseID:FBgn0001291 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001022366.1 Gene:jun-1 / 174452 WormBaseID:WBGene00012005 Length:319 Species:Caenorhabditis elegans


Alignment Length:292 Identity:75/292 - (25%)
Similarity:113/292 - (38%) Gaps:80/292 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TPVSAAANLSIQNAGSSGATAIQIIPKTEPVGEEGPMSLDFQSPNLNTSTPNPNKRPGSL-DLNS 66
            ||.||          |...|.:..:....|: ..||......||.|     .|....|.| ||:.
 Worm    97 TPASA----------SDMHTIVMSLLGNTPI-TSGPSIAPLSSPTL-----LPLVTSGDLDDLSM 145

  Fly    67 KSAKNKRIFAPLVI---NSPDLSSKTVNTPDLEKILLSNNLMQTPQPGKVFPTKAGPVTVEQLDF 128
            |...:..|..|.:|   ||||.|:..|.|..:                                 
 Worm   146 KILASSAIPGPPIISSSNSPDSSTTAVTTSQI--------------------------------- 177

  Fly   129 GRGFEEALHNLHTNSQAFPSANSAANSAANNTTAA--AMTAVNNGISGGTFTYTNMTEGFSVIKD 191
             ..|:..|:|..:::.|..|.....|......:|.  |...||:..|.|..              
 Worm   178 -TAFQPLLNNFVSSTTASTSRPDKLNLTPPQQSAEIYAFNGVNSDDSDGGL-------------- 227

  Fly   192 EPVNQASSPTVNPIDMEAQEKIKLERKRQRNRVAASKCRKRKLERISKLEDRV--KVLKGENVDL 254
                .:.|.:...:.::.|||.||||||.|||.||:|||::|::||.:||::|  :..:|:.:| 
 Worm   228 ----DSRSASRCGMALDDQEKKKLERKRARNRQAATKCRQKKMDRIKELEEQVLHEKHRGQRLD- 287

  Fly   255 ASIVKNLKDHVAQLKQQVMEHIAAGCTVPPNS 286
            |.::: |...:...::.|..|...||  |.||
 Worm   288 AELLE-LNRALEHFRRTVEHHSGNGC--PNNS 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JraNP_001260844.1 Jun <76..>144 CDD:281890 12/70 (17%)
bZIP_Jun 214..274 CDD:269844 25/61 (41%)
coiled coil 215..266 CDD:269844 23/52 (44%)
jun-1NP_001022366.1 AP3B1_C 82..>140 CDD:291462 14/58 (24%)
bZIP_Jun 246..306 CDD:269844 25/61 (41%)
coiled coil 247..298 CDD:269844 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001331
OrthoInspector 1 1.000 - - oto19495
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11462
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.100

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