DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jra and Atf2

DIOPT Version :9

Sequence 1:NP_001260844.1 Gene:Jra / 36057 FlyBaseID:FBgn0001291 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001020264.1 Gene:Atf2 / 11909 MGIID:109349 Length:487 Species:Mus musculus


Alignment Length:396 Identity:86/396 - (21%)
Similarity:141/396 - (35%) Gaps:83/396 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TAIQIIPKTEPVGEEGPMSLDFQSPNLNTSTP-NPNKRPGSLDLNS--KSAKNKRIFAPLVINSP 83
            |..|..|...|   |...|.:.:.|...|:.| :...||.||.:.:  .::.:..:.....:.||
Mouse   113 TTHQDSPLPHP---ESTTSDEKEVPLAQTAQPTSAIVRPASLQVPNVLLTSSDSSVIIQQAVPSP 174

  Fly    84 DLSSKTVNTPDLEKILLSNNLMQTPQPGKVFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAF-- 146
            ..|:.....|       |:|....|.||. ||      .:..|..|:....|:....|:|...  
Mouse   175 TSSTVITQAP-------SSNRPIVPVPGP-FP------LLLHLPNGQTMPVAIPASITSSNVHVP 225

  Fly   147 --------------------PSANSAANSAANNTTAAAMT----AVNNGIS----GGTFTYTNMT 183
                                ||:.....|.|.....||:|    .|.||.:    |.....|...
Mouse   226 AAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGSGLVRTQSE 290

  Fly   184 EGFSVIKDEPVNQASSPTVNPIDMEAQEKIKLERKR---------------QRNRVAASKCRKRK 233
            |.......:|....:....:|.....|.:....|:|               :|||.|||:||:::
Mouse   291 ESRPQSLQQPATSTTETPASPAHTTPQTQNTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKR 355

  Fly   234 LERISKLEDRVKVLKGENVDLASIVKNLKDHVAQLKQQVMEHIAAGCTVPPNSTDQXHLELSAGE 298
            ...:..||.:.:.|...|..|.|.|..|::.||||||.::.|  ..|.|        .::..:|.
Mouse   356 KVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLLAH--KDCPV-------TAMQKKSGY 411

  Fly   299 N--DEEDVALETETPSNPEDPEQPMPLEFFSSASTGALELEGSASQDISLTNSELLEEESDNEQP 361
            :  |::|.:.:...||:|.       .|....:|........|.|:..::..|.|.:....:.:|
Mouse   412 HTADKDDSSEDLSVPSSPH-------TEAIQHSSVSTSNGVSSTSKAEAVATSVLTQMADQSTEP 469

  Fly   362 LVLYIL 367
            .:..|:
Mouse   470 ALSQIV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JraNP_001260844.1 Jun <76..>144 CDD:281890 15/67 (22%)
bZIP_Jun 214..274 CDD:269844 24/74 (32%)
coiled coil 215..266 CDD:269844 18/65 (28%)
Atf2NP_001020264.1 C2H2 Zn finger 9..31 CDD:275370
GCN4_cent 47..84 CDD:213399
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..137 7/26 (27%)
PRK14951 <184..>312 CDD:237865 27/141 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..355 26/113 (23%)
Essential for its histone acetyltransferase activity. /evidence=ECO:0000250 278..281 0/2 (0%)
bZIP_ATF2 336..396 CDD:269835 22/59 (37%)
Basic motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 336..356 8/19 (42%)
coiled coil 337..388 CDD:269835 16/50 (32%)
Leucine-zipper. /evidence=ECO:0000255|PROSITE-ProRule:PRU00978 362..390 10/27 (37%)
Nuclear export signal. /evidence=ECO:0000250 387..396 6/8 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 407..453 10/52 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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