DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut4 and AMF1

DIOPT Version :9

Sequence 1:NP_523675.1 Gene:sut4 / 36055 FlyBaseID:FBgn0028560 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:506 Identity:89/506 - (17%)
Similarity:148/506 - (29%) Gaps:189/506 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FIGALGAFCLGAVIGWSG------P---VENEVKNSNAYNFTPRQTEWGLVGSLMTLGAAFSCIP 66
            |:|.|   |...::..:|      |   :.|....:||             |.|....:|:| :.
Yeast    45 FVGVL---CSAQLMTQAGLGQSLAPLHIIGNSFGTTNA-------------GQLSWFASAYS-LT 92

  Fly    67 VGVLI---GKIGRKTTMLILLPPFFIGWLLILLASHIAMLLLGRF-------VVGF--------- 112
            ||..|   |::|.                   :..|....:||.|       :.||         
Yeast    93 VGTFILIAGRLGD-------------------IFGHKKFFVLGFFWYALWSLLAGFSVYSNQIFF 138

  Fly   113 -CGGAFCVTCPMYVTEIAQVQYRGTMGCFFQLLIVFGILYAFVVGGFVKTFYFN----------- 165
             |..||....|.::...|......|.....:..:||.:..|...|||.....|:           
Yeast   139 DCCRAFQGMGPAFLLPNAIAILGRTYKPGRRKNMVFSLFGASAPGGFFLGAVFSSMLGQLAWWPW 203

  Fly   166 ------IACAILPVI-FFVLMIFMPESPIFLAQKGKAEKAEKSLKFLRGKDADVSGELKEMSAEG 223
                  |||.:|.|. :||:    |.:|:                                    
Yeast   204 AYWIMGIACFVLAVAGYFVI----PHTPM------------------------------------ 228

  Fly   224 QKEKASVGKILCRRITLKGLFLS-IGLMLFQ-----------QMTGINAIIFYSTFIFETAGSTL 276
            ....||..|:| .||...|.... :||:||.           |.....|::...||..       
Yeast   229 PSRDASSFKLL-ERIDFAGSVTGVVGLILFNFAWNQGPVVGWQTPYTYALLIVGTFFL------- 285

  Fly   277 EPRISTIIVGIVQAIATIISILVIEKVGRKILLLVSACMMGISTL-IMALYFGMLMKSGVGWLAL 340
                  :|...:::.|. ..:|....:......::|....|.::. |...|....|:...|...|
Yeast   286 ------VIFAYIESRAA-FPLLPFAALSSDTAFVLSCIAAGWASFGIWIFYTWQFMEDSRGQTPL 343

  Fly   341 IAVCVF------------IIGFSLGFGPVPWLMMAELFAEDVKA--LAGSIAGTTNWCFAFIVTL 391
            ::...|            ..||.|...|...:|:..:.|..|..  :|.:....|.|...|:..:
Yeast   344 LSSAQFSPVAISGFCAAVTTGFLLSHTPPSTVMLFAMTAFTVGTILIATAPVHQTYWAQTFVSII 408

  Fly   392 LFP------------VLND------------IIGATACFAIFFGFAVAAFV 418
            :.|            :|:|            ::.....::|..|..:|..:
Yeast   409 VMPWGMDMSFPAATIMLSDSMPHEHQGLAASLVNTVVNYSISIGLGIAGTI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut4NP_523675.1 Sugar_tr 9..436 CDD:278511 89/506 (18%)
MFS 47..424 CDD:119392 80/461 (17%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 87/503 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.