DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut4 and VVS1

DIOPT Version :9

Sequence 1:NP_523675.1 Gene:sut4 / 36055 FlyBaseID:FBgn0028560 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_009800.1 Gene:VVS1 / 852543 SGDID:S000000445 Length:488 Species:Saccharomyces cerevisiae


Alignment Length:405 Identity:117/405 - (28%)
Similarity:198/405 - (48%) Gaps:30/405 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TEWGLVGSLMTLGAAFSCIPVGVLIGKIGRKTTMLILLPPFFIGWLLILLASHIAMLLLGRFVVG 111
            :::|.:.|:.::|..|.....|....:.|||...:.......:..||:..::....||.|||:||
Yeast    85 SQYGAITSIFSIGGLFGSYYAGNWANRYGRKYVSMGASAMCMVSSLLLFFSNSYLQLLFGRFLVG 149

  Fly   112 F-CGGAFCVTCPMYVTEIAQVQYRGTMGCFFQLLIVFGILYAFVVG-GFVKTF---YFNIACAIL 171
            . ||.|..:| |:::.|||.|::||.||...|:.|..|||....:. .:..::   :...:.:::
Yeast   150 MSCGTAIVIT-PLFINEIAPVEWRGAMGSMNQVSINLGILLTQTLALKYADSYNWRWLLFSGSVI 213

  Fly   172 PVIFFVLMIFMPESPIFLAQKGKAEKAEKSLKFLR-GKDADVSGELKE-MSAEG------QKEKA 228
            .|...:..:.:.|||.:|...|...:||.:|..|| |.......|::: ..:.|      ..|:.
Yeast   214 AVANILAWLKVDESPRWLVSHGFVSEAETALFKLRPGTYQQAKQEIQDWQRSHGHNRDPESSEET 278

  Fly   229 SVGKILCRRIT----LKGLFLSIGLMLFQQMTGINAIIFYSTFIFETAGSTLEPRIS---TIIVG 286
            ..|..|.:.:|    .|...:.:.::..||..|||:||||..   :..|..| |..|   ...:.
Yeast   279 HSGPTLWQYVTDPSYKKPRTVILAILSCQQFCGINSIIFYGV---KVIGKIL-PDYSIQVNFAIS 339

  Fly   287 IVQAIATIISILVIEKVGRKILLLVSACMMGISTLIMALYFGMLMKSGVGWLALIAVCVFIIGFS 351
            |:..:.|:.:..:|:.|||:.|||.|..:|...:|::::  |:.:  .|.:|.:.|..|:|..|:
Yeast   340 ILNVVVTLAASAIIDHVGRRPLLLASTTVMTAMSLLISV--GLTL--SVSFLLVTATFVYIAAFA 400

  Fly   352 LGFGPVPWLMMAELFAEDVKALAGSIAGTTNWCFAFIVTLLFPVLNDIIGATACFAIFFGFAVAA 416
            :|.||:|:|::.||......|.|.|.....||...|||..|||:.:.::|... ||||...|...
Yeast   401 IGLGPIPFLIIGELSYPQDAATAQSFGTVCNWLATFIVGYLFPIGHGLMGGYV-FAIFAAIAAMF 464

  Fly   417 FVFILFLIPETKGKT 431
            ..::...:|||||||
Yeast   465 ATYVYKRVPETKGKT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut4NP_523675.1 Sugar_tr 9..436 CDD:278511 117/405 (29%)
MFS 47..424 CDD:119392 110/396 (28%)
VVS1NP_009800.1 MFS_GLUT_Class1_2_like 28..478 CDD:340915 114/402 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.