DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut4 and AT5G18840

DIOPT Version :9

Sequence 1:NP_523675.1 Gene:sut4 / 36055 FlyBaseID:FBgn0028560 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana


Alignment Length:441 Identity:140/441 - (31%)
Similarity:232/441 - (52%) Gaps:27/441 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FIGALGAFCLGAVIGWSGPVENEVKNSNAYNFTPRQTEWGLVGSLMTLGAAFSCIPVGVLIGKIG 75
            |:...|:|..|:.:|:|.|.::.::.    :......|:.:.||::|:||....:..|.:....|
plant    49 FVAVCGSFEFGSCVGYSAPTQSSIRQ----DLNLSLAEFSMFGSILTIGAMLGAVMSGKISDFSG 109

  Fly    76 RKTTMLILLPPFFIGWLLILLASHIAMLLLGRFVVGFCGGAFCVTCPMYVTEIAQVQYRGTMGCF 140
            ||..|.........|||.:.......:|.:|||..|:..|.|....|:|:.||:....||.:...
plant   110 RKGAMRTSACFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNLRGGLTTL 174

  Fly   141 FQLLIVFGILYAFVVGGFV--KTFYFNIACAILPVIFFVL-MIFMPESPIFLAQKGKAEKAEKSL 202
            .||:||.|...:|::|..:  ||....   .:.|.|..:. :.|:||||.:||:.|..::...:|
plant   175 NQLMIVIGSSVSFLIGSLISWKTLALT---GLAPCIVLLFGLCFIPESPRWLAKAGHEKEFRVAL 236

  Fly   203 KFLRGKDADVSGELKEMSAEGQK----EKASVGKILCRRITLKGLFLSIGLMLFQQMTGINAIIF 263
            :.|||||||::.|...:....|.    .||.:..::.::.. :.:.:.:.||:|||..|||.|.|
plant   237 QKLRGKDADITNEADGIQVSIQALEILPKARIQDLVSKKYG-RSVIIGVSLMVFQQFVGINGIGF 300

  Fly   264 YSTFIFETAGSTLEPRISTIIVGIVQAIATIISILVIEKVGRKILLLVSA------CMM-GISTL 321
            |::..|..||.| ..::.||.:..||...|::..::|:|.||:.|:::||      |:: |.|.|
plant   301 YASETFVKAGFT-SGKLGTIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFL 364

  Fly   322 IMALYFGMLMKSGVGWLALIAVCVFIIGFSLGFGPVPWLMMAELFAEDVKALAGSIAGTTNWCFA 386
            :..   ..|:...|..||:..|.:::..||:|.|||||::|:|:|..:||.:|||:....||..|
plant   365 LKG---QSLLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGA 426

  Fly   387 FIVTLLFPVLNDIIGATACFAIFFGFAVAAFVFILFLIPETKGKTLNEIQA 437
            :.|:..|..|.. ..:...|.::..||.|..:|:..::||||||||.||||
plant   427 WAVSYTFNFLMS-WSSPGTFYLYSAFAAATIIFVAKMVPETKGKTLEEIQA 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut4NP_523675.1 Sugar_tr 9..436 CDD:278511 137/438 (31%)
MFS 47..424 CDD:119392 121/390 (31%)
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 136/436 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H101228
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.920

Return to query results.
Submit another query.