DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sut4 and CG17929

DIOPT Version :9

Sequence 1:NP_523675.1 Gene:sut4 / 36055 FlyBaseID:FBgn0028560 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_650532.2 Gene:CG17929 / 41978 FlyBaseID:FBgn0038415 Length:491 Species:Drosophila melanogaster


Alignment Length:490 Identity:110/490 - (22%)
Similarity:181/490 - (36%) Gaps:134/490 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VGFIGALGAFCLGAVIGWSGPVENEVKNSNAYNFTPRQTEWGLVGSLMTLGAAFSCI-PVGVLIG 72
            |.|:...|........||     |:..|:.|..                   .|.|. .:|||.|
  Fly    58 VFFLYVYGGMDFAHSAGW-----NQTLNTTATQ-------------------VFKCSWFIGVLAG 98

  Fly    73 KIGRKTTMLIL--LPPFFIGWLLILLASHI--------AMLLLGRFVVGFCGGAFCVTCPMYV-- 125
            ......||..|  ||.:.:|.|:.|..|.|        ..||..|:|.|  .|...:|.|..:  
  Fly    99 AALASLTMTFLPKLPFYVLGGLMQLTGSIIFTCKPFDYGCLLAARYVAG--AGIGLITVPFLIHS 161

  Fly   126 TEIAQVQYRGTMGCFFQLLIVFGILYAFVVGGFVKTFY-----------FNIACAILPVIFFVLM 179
            .|:|...:||..|...|..:..||.        ::..|           .|....|:.::|.::.
  Fly   162 AEVATDNHRGVSGSMEQCGLALGIA--------IQVIYDTQWVDDKEASVNEVHGIIGIVFSIIG 218

  Fly   180 IFMP----ESPIFLAQKGKAEKAEK-SLKFLRGKDADVSGELKEMS---AEGQKEKASVGKILCR 236
            :.|.    ||||:..:..:.|||.| ..|.|...:..|..|.:|:.   ||.||      :..|:
  Fly   219 LGMTALSIESPIYYLRIKQKEKARKCHAKLLGSFNHSVDQEFEEIQLYVAESQK------RTFCQ 277

  Fly   237 RITLKGLFLSIGLMLFQQMTGINAIIFYSTFIFETAGSTLEPRIS---TIIVGIVQAIATIISIL 298
            .:.: .:...|.|:|::.....:..:..|..:.::|..| |..||   ..:.|:|:.:..:::..
  Fly   278 ELRI-SVVPFIKLLLYRGFVAFSFSLPLSESLIKSALLT-EGFISCWPVTVWGLVRLLGALVAQG 340

  Fly   299 VIEKVGRKILLLVSACMMGISTLIMA------------LYFGMLMKSGVGWLAL----------- 340
            .::|:|||.:.||....|.|..|.||            .|...:.:.|:.:.|.           
  Fly   341 FLDKLGRKFVSLVGLLCMAILMLCMAASYANPANALMTYYMYQVWRLGLAFQAFAGLFVCSSSVY 405

  Fly   341 ------IAVCVFIIGFSLGFGPVPWLMMAELFAEDVKALAGSIAGTTNWCFAFIVTLLFPVLNDI 399
                  |.|..|.:|:.:||.....::          .:.|...|..|:.:.:.:::...:|   
  Fly   406 LGEAFPIKVKPFFVGYIIGFEQTIHII----------NIVGYNKGYENFFYHYYLSVGIILL--- 457

  Fly   400 IGATACFAIFFGFAVAAFVFILFLIPETKGKTLNE 434
            :|     .:|||          .:|||||..||.|
  Fly   458 VG-----VVFFG----------IVIPETKKTTLRE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut4NP_523675.1 Sugar_tr 9..436 CDD:278511 110/490 (22%)
MFS 47..424 CDD:119392 94/440 (21%)
CG17929NP_650532.2 Sugar_tr 67..482 CDD:278511 107/481 (22%)
MFS 295..>425 CDD:119392 26/130 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444355
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.