DRSC/TRiP Functional Genomics Resources

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Protein Alignment sut4 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_523675.1 Gene:sut4 / 36055 FlyBaseID:FBgn0028560 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:557 Identity:135/557 - (24%)
Similarity:232/557 - (41%) Gaps:128/557 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FIVGFIGALGAFCLGAVIGWSGPVENEVKNSNAYNFTPRQTEWGLVGSLMTLG-AAFSCIPVGVL 70
            :::.|...:|.|..|...|........|  .||....|..:.|..:...:|.| ||...:..|..
 Worm    29 YMLAFSAVIGGFLFGYDTGIVSAAMLYV--PNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPG 91

  Fly    71 IGKIGRKTTMLILLPPFFIGWLLILLASHIAMLLLGRFVVGFCGGAFCVTCPMYVTEIAQVQYRG 135
            ...:|||..::.....|.||.::...|....:||:||.::|...|...:..|:||:|.:....||
 Worm    92 SDFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRG 156

  Fly   136 TMGCFFQLLIVFGILYAFVVGGFVK-----------TFYFNIACAILPVIFFVLMIFMPESPIFL 189
            .:...|||:|..|::.|.::||...           .|.|   .|:..:|.||..:|:||||.:|
 Worm   157 KLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAF---AAVPAIIQFVCFLFLPESPRWL 218

  Fly   190 AQKGKAEKAEKSL-KFLRGKDADVSGELKEMSAEGQKE---KA-------SVGKILCRRITLKGL 243
            .:.|:..:|.:.| :...|....|..|:.|:|...::|   ||       ::.:||......|.:
 Worm   219 YEHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAM 283

  Fly   244 FLSIGLMLFQQMTGINAIIFYSTFIFETAGSTLEPRISTIIVGI----VQAIATIISILVIEKVG 304
            .:...|.:|||::|||.:::|:..|..:||  ::...:||.:.:    :..:.|.|.|.::|:||
 Worm   284 IIGSLLQMFQQLSGINTVMYYTGNIIRSAG--VKDNHTTIWISVGTSAINFLGTFIPIALVERVG 346

  Fly   305 RKILLLVSACMMGISTLIMAL-------------------------------------------- 325
            |::|||||  |:|:...::|:                                            
 Worm   347 RRVLLLVS--MIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCV 409

  Fly   326 -----------------------------------YFGMLMKSGVG--W-----------LALIA 342
                                               .|..|..:|..  |           |.:|.
 Worm   410 TDENCGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIII 474

  Fly   343 VCVFIIGFSLGFGPVPWLMMAELFAEDVKALAGSIAGTTNWCFAFIVTLLFPVLNDIIGATACFA 407
            :..:::.||.|:.|:||::.||.:....::.|.|::...||.|..||:|.|..|:........|.
 Worm   475 MVFYLLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFF 539

  Fly   408 IFFGFAVAAFVFILFLIPETKGKTLNEIQAKMGEKAE 444
            |:.|..:.|.||:.|.:|||||.:::|::.....|.|
 Worm   540 IYCGCTMVALVFVFFFVPETKGYSIDEVEMLFMTKEE 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sut4NP_523675.1 Sugar_tr 9..436 CDD:278511 133/545 (24%)
MFS 47..424 CDD:119392 118/495 (24%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 126/532 (24%)
MFS <190..>249 CDD:421695 18/61 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157923
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.861654 Normalized mean entropy S2375
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.690

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