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Protein Alignment egr and eda
DIOPT Version :9
Sequence 1: | NP_724878.2 |
Gene: | egr / 36054 |
FlyBaseID: | FBgn0033483 |
Length: | 415 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001108537.1 |
Gene: | eda / 798740 |
ZFINID: | ZDB-GENE-050107-6 |
Length: | 359 |
Species: | Danio rerio |
Alignment Length: | 101 |
Identity: | 29/101 - (28%) |
Similarity: | 54/101 - (53%) |
Gaps: | 5/101 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 317 TRDGVLTVTNTGLYYVYAQ--ICYNNSHDQNGFIVFQGDTPFLQCLNTVPTNMPHKVHTCHTSGL 379
:|.|.|.|...|.|::|:| :.|.|..|...:.|....||||:|..::.|.. .|.:||:|:|:
Zfish 253 SRSGELEVLLDGTYFIYSQVEVYYLNFTDIASYEVMVDKTPFLRCTRSIETGQ-RKFNTCYTAGV 316
Fly 380 IHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415
..|...:||.::.::.|.: :...|:.::.|..::
Zfish 317 CLLRARQRISIRMVYEDTS--ISMSNHTTFLGSIRL 350
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
egr | NP_724878.2 |
TNF |
278..413 |
CDD:238108 |
29/97 (30%) |
eda | NP_001108537.1 |
TNF |
214..346 |
CDD:294099 |
28/95 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
52 |
1.000 |
Domainoid score |
I11510 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_28MSH |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto41139 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR15151 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.910 |
|
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