DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr and Tnfsf13

DIOPT Version :10

Sequence 1:NP_724878.2 Gene:egr / 36054 FlyBaseID:FBgn0033483 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_076006.2 Gene:Tnfsf13 / 69583 MGIID:1916833 Length:241 Species:Mus musculus


Alignment Length:224 Identity:45/224 - (20%)
Similarity:92/224 - (41%) Gaps:49/224 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 IADVRNEEQNIQ--GNHTELQEKSSNEATSKESPAPLH--------HRRRMHSRHRHLLVRKGES 267
            :..:|.|...:|  |..::.|.:...::..::||..|.        .|||.....:|   :|..|
Mouse    46 LQSLRREVSRLQRSGGPSQKQGERPWQSLWEQSPDVLEAWKDGAKSRRRRAVLTQKH---KKKHS 107

  Fly   268 LLS------ARSEDSRPAAHFHLSSRRRHQGSMGYHGDMYIGNDNERNSYQGHFQTRDGVLTVTN 326
            :|.      ....||...........||.:|                      .:.:..::.|.:
Mouse   108 VLHLVPVNITSKADSDVTEVMWQPVLRRGRG----------------------LEAQGDIVRVWD 150

  Fly   327 TGLYYVYAQICYNNSHDQNGFIVF---QG--DTPFLQCLNTVPTNMPHKVHTCHTSGLIHLERNE 386
            ||:|.:|:|:.:::.....|.:|.   ||  :|.| :|:.::|::.....::|:::|:.||.:.:
Mouse   151 TGIYLLYSQVLFHDVTFTMGQVVSREGQGRRETLF-RCIRSMPSDPDRAYNSCYSAGVFHLHQGD 214

  Fly   387 RIHLKDIHNDRNAVLREGNNRSYFGIFKV 415
            .|.:|...  .||.|....:.::.|..|:
Mouse   215 IITVKIPR--ANAKLSLSPHGTFLGFVKL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egrNP_724878.2 TNF 278..413 CDD:238108 27/139 (19%)
Tnfsf13NP_076006.2 TNF 108..239 CDD:238108 30/155 (19%)

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