DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr and TNFSF12-TNFSF13

DIOPT Version :10

Sequence 1:NP_724878.2 Gene:egr / 36054 FlyBaseID:FBgn0033483 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_742086.1 Gene:TNFSF12-TNFSF13 / 407977 HGNCID:33537 Length:330 Species:Homo sapiens


Alignment Length:389 Identity:71/389 - (18%)
Similarity:136/389 - (34%) Gaps:123/389 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AQRR--------TRQLIPLVLGFIGLGLVVAILALTIWQTTRVSHLDKELKSLKRVVDNLQQRLG 86
            :|||        |..|:||.|   ||||.:|.|.|.:                  .|.:|..|..
Human     6 SQRRRGRRGEPGTALLVPLAL---GLGLALACLGLLL------------------AVVSLGSRAS 49

  Fly    87 INYLDEFDEFQKEYENALIDYPKKVDGLTDEEDDDDGDGLDSIADDEDDDVSYSSVDDVGADYED 151
            ::       .|:..:..|:           .|:|.|...|:...::..|...:            
Human    50 LS-------AQEPAQEELV-----------AEEDQDPSELNPQTEESQDPAPF------------ 84

  Fly   152 YTDMLNKLNNAHTGTTPTSETTAEGEGETDSASSASNDDNVFDDFTSYNAHKKKQERKSRSIADV 216
                ||:|...........:|.|.                     .:..||.:...|..:..|  
Human    85 ----LNRLVRPRRSAPKGRKTRAR---------------------RAIAAHYEVHPRPGQDGA-- 122

  Fly   217 RNEEQNIQGNHTELQEKSSNEATSKESPAPLHHRRRMHSRHRHLLVRKGESLLSARSEDSRPAAH 281
               :..:.|..:..:|...|      |.:||.:.|::   ...::.|.|...|..:|.|:..|..
Human   123 ---QAGVDGTVSGWEEARIN------SSSPLRYNRQI---GEFIVTRAGLYYLYCQSSDALEAWE 175

  Fly   282 FHLSSRRRH----QGSMGYHGDMYI---------GNDNERNSYQGHFQTRDGV------LTVTNT 327
            ....||:|.    |.....|..:::         .:|.....:|...:...|:      :.:.:.
Human   176 NGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDA 240

  Fly   328 GLYYVYAQICYNNSHDQNGFIVF---QG--DTPFLQCLNTVPTNMPHKVHTCHTSGLIHLERNE 386
            |:|.:|:|:.:.:.....|.:|.   ||  :|.| :|:.::|::.....::|:::|:.||.:.:
Human   241 GVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLF-RCIRSMPSHPDRAYNSCYSAGVFHLHQGD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egrNP_724878.2 TNF 278..413 CDD:238108 25/133 (19%)
TNFSF12-TNFSF13NP_742086.1 TNF 131..>166 CDD:444713 9/43 (21%)
TNF 197..328 CDD:238108 19/108 (18%)

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