DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr and TNFSF12-TNFSF13

DIOPT Version :9

Sequence 1:NP_724878.2 Gene:egr / 36054 FlyBaseID:FBgn0033483 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_742086.1 Gene:TNFSF12-TNFSF13 / 407977 HGNCID:33537 Length:330 Species:Homo sapiens


Alignment Length:389 Identity:71/389 - (18%)
Similarity:136/389 - (34%) Gaps:123/389 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AQRR--------TRQLIPLVLGFIGLGLVVAILALTIWQTTRVSHLDKELKSLKRVVDNLQQRLG 86
            :|||        |..|:||.|   ||||.:|.|.|.:                  .|.:|..|..
Human     6 SQRRRGRRGEPGTALLVPLAL---GLGLALACLGLLL------------------AVVSLGSRAS 49

  Fly    87 INYLDEFDEFQKEYENALIDYPKKVDGLTDEEDDDDGDGLDSIADDEDDDVSYSSVDDVGADYED 151
            ::       .|:..:..|:           .|:|.|...|:...::..|...:            
Human    50 LS-------AQEPAQEELV-----------AEEDQDPSELNPQTEESQDPAPF------------ 84

  Fly   152 YTDMLNKLNNAHTGTTPTSETTAEGEGETDSASSASNDDNVFDDFTSYNAHKKKQERKSRSIADV 216
                ||:|...........:|.|.                     .:..||.:...|..:..|  
Human    85 ----LNRLVRPRRSAPKGRKTRAR---------------------RAIAAHYEVHPRPGQDGA-- 122

  Fly   217 RNEEQNIQGNHTELQEKSSNEATSKESPAPLHHRRRMHSRHRHLLVRKGESLLSARSEDSRPAAH 281
               :..:.|..:..:|...|      |.:||.:.|::   ...::.|.|...|..:|.|:..|..
Human   123 ---QAGVDGTVSGWEEARIN------SSSPLRYNRQI---GEFIVTRAGLYYLYCQSSDALEAWE 175

  Fly   282 FHLSSRRRH----QGSMGYHGDMYI---------GNDNERNSYQGHFQTRDGV------LTVTNT 327
            ....||:|.    |.....|..:::         .:|.....:|...:...|:      :.:.:.
Human   176 NGERSRKRRAVLTQKQKKQHSVLHLVPINATSKDDSDVTEVMWQPALRRGRGLQAQGYGVRIQDA 240

  Fly   328 GLYYVYAQICYNNSHDQNGFIVF---QG--DTPFLQCLNTVPTNMPHKVHTCHTSGLIHLERNE 386
            |:|.:|:|:.:.:.....|.:|.   ||  :|.| :|:.::|::.....::|:::|:.||.:.:
Human   241 GVYLLYSQVLFQDVTFTMGQVVSREGQGRQETLF-RCIRSMPSHPDRAYNSCYSAGVFHLHQGD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egrNP_724878.2 TNF 278..413 CDD:238108 25/133 (19%)
TNFSF12-TNFSF13NP_742086.1 TNF 131..>166 CDD:294099 9/43 (21%)
TNF 197..328 CDD:238108 19/108 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15151
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10146
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.040

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