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Protein Alignment egr and Eda
DIOPT Version :9
Sequence 1: | NP_724878.2 |
Gene: | egr / 36054 |
FlyBaseID: | FBgn0033483 |
Length: | 415 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001292172.1 |
Gene: | Eda / 302424 |
RGDID: | 1563178 |
Length: | 391 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 42/151 - (27%) |
Similarity: | 73/151 - (48%) |
Gaps: | 16/151 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 273 SEDSRPAAHFHLSSRRRHQGS-MGYHGDMYIG--NDNER---NSYQGHFQTRDGVLTVTNTGLYY 331
:.:::||. .||.. ||| :....|:..| ||..| |........|.|.|.|...|.|:
Rat 243 TRENQPAV-VHLQG----QGSAIQVKNDLSGGVLNDWSRITMNPKVFKLHPRSGELEVLVDGTYF 302
Fly 332 VYAQ--ICYNNSHDQNGFIVFQGDTPFLQCLNTVPTNMPHKVHTCHTSGLIHLERNERIHLKDIH 394
:|:| :.|.|..|...:.|...:.|||||..::.|...: .:||:|:|:..|:..::|.:|.:|
Rat 303 IYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTN-YNTCYTAGVCLLKARQKIAVKMVH 366
Fly 395 NDRNAVLREGNNRSYFGIFKV 415
.|.: :....:.::||..::
Rat 367 ADIS--INMSKHTTFFGAIRL 385
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
egr | NP_724878.2 |
TNF |
278..413 |
CDD:238108 |
42/142 (30%) |
Eda | NP_001292172.1 |
TNF |
249..383 |
CDD:238108 |
41/141 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
56 |
1.000 |
Domainoid score |
I10800 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_28MSH |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto96981 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR15151 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.910 |
|
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