DRSC/TRiP Functional Genomics Resources

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Protein Alignment egr and Tnfsf11

DIOPT Version :9

Sequence 1:NP_724878.2 Gene:egr / 36054 FlyBaseID:FBgn0033483 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_035743.2 Gene:Tnfsf11 / 21943 MGIID:1100089 Length:316 Species:Mus musculus


Alignment Length:171 Identity:40/171 - (23%)
Similarity:66/171 - (38%) Gaps:48/171 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 DSRPAAHFHLSSRRRHQG------SMGYH--GDMYIGNDNERNSYQGHFQTRDGVLTVTNTGLYY 331
            :::|.||..:::.....|      |..||  |...|.|....|          |.|.|...|.||
Mouse   160 EAQPFAHLTINAASIPSGSHKVTLSSWYHDRGWAKISNMTLSN----------GKLRVNQDGFYY 214

  Fly   332 VYAQICYNNSHDQNGFIVFQGDTPFLQCL-------NTVPT---------------NMPHKVHTC 374
            :||.||:.: |:.:|.:    .|.:||.:       ..:|:               |.....::.
Mouse   215 LYANICFRH-HETSGSV----PTDYLQLMVYVVKTSIKIPSSHNLMKGGSTKNWSGNSEFHFYSI 274

  Fly   375 HTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415
            :..|...|...|.|.:: :.|.  ::|....:.:|||.|||
Mouse   275 NVGGFFKLRAGEEISIQ-VSNP--SLLDPDQDATYFGAFKV 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egrNP_724878.2 TNF 278..413 CDD:238108 37/164 (23%)
Tnfsf11NP_035743.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
TNF 184..312 CDD:278650 34/145 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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