DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment egr and Eda

DIOPT Version :9

Sequence 1:NP_724878.2 Gene:egr / 36054 FlyBaseID:FBgn0033483 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_034229.1 Gene:Eda / 13607 MGIID:1195272 Length:391 Species:Mus musculus


Alignment Length:151 Identity:42/151 - (27%)
Similarity:73/151 - (48%) Gaps:16/151 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 SEDSRPAAHFHLSSRRRHQGS-MGYHGDMYIG--NDNER---NSYQGHFQTRDGVLTVTNTGLYY 331
            :.:::||. .||..    ||| :....|:..|  ||..|   |........|.|.|.|...|.|:
Mouse   243 TRENQPAV-VHLQG----QGSAIQVKNDLSGGVLNDWSRITMNPKVFKLHPRSGELEVLVDGTYF 302

  Fly   332 VYAQ--ICYNNSHDQNGFIVFQGDTPFLQCLNTVPTNMPHKVHTCHTSGLIHLERNERIHLKDIH 394
            :|:|  :.|.|..|...:.|...:.|||||..::.|...: .:||:|:|:..|:..::|.:|.:|
Mouse   303 IYSQVEVYYINFTDFASYEVVVDEKPFLQCTRSIETGKTN-YNTCYTAGVCLLKARQKIAVKMVH 366

  Fly   395 NDRNAVLREGNNRSYFGIFKV 415
            .|.:  :....:.::||..::
Mouse   367 ADIS--INMSKHTTFFGAIRL 385

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
egrNP_724878.2 TNF 278..413 CDD:238108 42/142 (30%)
EdaNP_034229.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..129