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Protein Alignment egr and tnfsf13
DIOPT Version :9
Sequence 1: | NP_724878.2 |
Gene: | egr / 36054 |
FlyBaseID: | FBgn0033483 |
Length: | 415 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001161936.1 |
Gene: | tnfsf13 / 100149404 |
ZFINID: | ZDB-GENE-120508-6 |
Length: | 199 |
Species: | Danio rerio |
Alignment Length: | 183 |
Identity: | 39/183 - (21%) |
Similarity: | 80/183 - (43%) |
Gaps: | 31/183 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 248 HHR--RRMHSR---HRHLLVRKGESLLSARSEDSRPAAHFHLSSRRRHQGSMGYHGDMYIGNDNE 307
:|| .|.|.| .||:..:|.: |.:..:.....||.. ..|..|:.| |:.
Zfish 33 YHRFPDRAHRRVRDKRHVTEQKKQ-----RKKRQKQHTFLHLVP----VSSQSYNDD-----DST 83
Fly 308 RNSY-----QG-HFQTRDGVLTVTNTGLYYVYAQICYNNSHDQNGFIVFQ----GDTPFLQCLNT 362
..|: :| ..|.....:||...|.|::|:|:.|.::....|.::.: .::..::||.:
Zfish 84 VLSWAVGQSRGIGLQLSGDTVTVEAEGSYFIYSQVLYRDTTWVMGHVITKRQKGAESKLMKCLKS 148
Fly 363 VPTNMPHKVHTCHTSGLIHLERNERIHLKDIHNDRNAVLREGNNRSYFGIFKV 415
:|:|:...::||:::|:..||....:.|.........:|.. :.::.|:|.:
Zfish 149 MPSNVSQPLNTCYSAGIYFLESGSTLQLSVPRRSAELILTA--HATFMGLFSI 199
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
egr | NP_724878.2 |
TNF |
278..413 |
CDD:238108 |
29/144 (20%) |
tnfsf13 | NP_001161936.1 |
TNF |
66..197 |
CDD:294099 |
29/141 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0008250 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15151 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.010 |
|
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