DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and AT1G03740

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_171870.4 Gene:AT1G03740 / 839423 AraportID:AT1G03740 Length:740 Species:Arabidopsis thaliana


Alignment Length:309 Identity:127/309 - (41%)
Similarity:187/309 - (60%) Gaps:6/309 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 RPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMD-QEKDGLPISGLREIMILKQCHHEN 111
            |..:.||||.::|:|:|..||||||...|:||||||||.| .:.:.:.... |||:::::..|.|
plant   208 RRANTFEKLEKIGQGTYSSVYRARDLLHNKIVALKKVRFDLNDMESVKFMA-REIIVMRRLDHPN 271

  Fly   112 IVRLREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHR 176
            :::|..::......|::||.::.:.||..:.......|||.:|||...|:|..|::.|||.::||
plant   272 VLKLEGLITAPVSSSLYLVFEYMDHDLLGLSSLPGVKFTEPQVKCYMRQLLSGLEHCHSRGVLHR 336

  Fly   177 DLKVSNLLMTDKGCIKVADFGLARMFSNPPK--PMTPQMVTLWYRAPELLLGCRTHTTAVDMWAF 239
            |:|.||||:..||.:|:||||||..| :|.|  .:|..:||||||.||||||...:...||:|:.
plant   337 DIKGSNLLIDSKGVLKIADFGLATFF-DPAKSVSLTSHVVTLWYRPPELLLGASHYGVGVDLWST 400

  Fly   240 GCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFH 304
            |||||||..|||:|||.:|:.||..|..|.|:|:|:.|.. ..||:...|..:......::..|.
plant   401 GCILGELYAGKPILPGKTEVEQLHKIFKLCGSPTENYWRK-QKLPSSAGFKTAIPYRRKVSEMFK 464

  Fly   305 MIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFP 353
            ....|..:||..|...:|..|::|:..|:|:||...|.||||..:|.:|
plant   465 DFPASVLSLLETLLSIDPDHRSSADRALESEYFKTKPFACDPSNLPKYP 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 126/307 (41%)
S_TKc 53..337 CDD:214567 117/286 (41%)
AT1G03740NP_171870.4 STKc_CDK9_like 213..497 CDD:270832 117/286 (41%)
S_TKc 213..497 CDD:214567 117/286 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.880

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