DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and IBS1

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001321211.1 Gene:IBS1 / 838448 AraportID:AT1G18670 Length:720 Species:Arabidopsis thaliana


Alignment Length:344 Identity:135/344 - (39%)
Similarity:193/344 - (56%) Gaps:30/344 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQ-EKDGLPISGLREIMILKQCHHENIVRLR 116
            ||||.::|:|:|..|:|||:|.:..||||||||.|. |.:.:.... |||:||::.:|.||::|.
plant   131 FEKLEKIGQGTYSSVFRARETETGRIVALKKVRFDNFEPESVRFMA-REILILRKLNHPNIIKLE 194

  Fly   117 EVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVS 181
            .:|..|...||.||.::.|.||..:|.:....||..::||...|:|..|.:.|:|.::|||:|.|
plant   195 GIVTSKLSCSIHLVFEYMEHDLTGLLSSPDIDFTTPQIKCYMKQLLSGLDHCHARGVMHRDIKGS 259

  Fly   182 NLLMTDKGCIKVADFGLARM--FSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILG 244
            |||:.::|.:||||||||..  .|...:|:|.::||||||.||||||...:..:||:|:.||:..
plant   260 NLLVNNEGILKVADFGLANFCNASGNKQPLTSRVVTLWYRPPELLLGATEYGASVDLWSVGCVFA 324

  Fly   245 ELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNL---TPKFHMI 306
            |||:|||:|.|.:|:.||..|..|.|:|.|..|.. :.||....|. .||.|:..   |.|...:
plant   325 ELLIGKPVLQGRTEVEQLHKIFKLCGSPPEDYWKK-SKLPHAMLFK-PQQHYDGCLRETLKLKGL 387

  Fly   307 GQSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTF-------PQHRNNA----- 359
            ..:..||:..|....|..|.||...|.|:||...|.||||..:|.:       .:||.:.     
plant   388 SDADINLIETLLSIQPHKRGTASTALVSQYFTSKPFACDPSSLPVYSPSKEIDAKHREDTTRKKI 452

  Fly   360 ---------APAPAVQPPA 369
                     :..|..:|||
plant   453 SGNGRRGTESRKPTRKPPA 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 129/312 (41%)
S_TKc 53..337 CDD:214567 121/289 (42%)
IBS1NP_001321211.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.880

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