DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk5

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_571794.1 Gene:cdk5 / 65234 ZFINID:ZDB-GENE-010131-2 Length:292 Species:Danio rerio


Alignment Length:304 Identity:128/304 - (42%)
Similarity:184/304 - (60%) Gaps:24/304 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVR 114
            :.::|||.::|||:||.|::|::..::||||||:||:|.:.:|:|.|.||||.:||:..|:||||
Zfish     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

  Fly   115 LREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLK 179
            |.:|:  .|...:.||.::|:|||....|:.:.......||....|:||.|.:.|||.::|||||
Zfish    66 LHDVL--HSDKKLTLVFEYCDQDLKKYFDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLK 128

  Fly   180 VSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILG 244
            ..|||:...|.:|:|||||||.|..|.:..:.::||||||.|::|.|.:.::|::|||:.|||..
Zfish   129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193

  Fly   245 ELL-LGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYN---------NL 299
            ||. .|:||.|||....||..|..|||.|:|..|.....||       ..:||.         |:
Zfish   194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWQTMNKLP-------DYKPYPMYPATTSLVNV 251

  Fly   300 TPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVD--PP 341
            .||   :..:||:||..|...||..|.:|||.|:..||.|  ||
Zfish   252 VPK---LSSTGRDLLQNLLKCNPVQRISAEEALQHPYFADFCPP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 128/304 (42%)
S_TKc 53..337 CDD:214567 123/293 (42%)
cdk5NP_571794.1 STKc_CDK5 3..286 CDD:143344 123/294 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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