DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk7

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_998126.2 Gene:cdk7 / 405897 ZFINID:ZDB-GENE-010320-2 Length:345 Species:Danio rerio


Alignment Length:345 Identity:138/345 - (40%)
Similarity:200/345 - (57%) Gaps:37/345 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRM---DQEKDGLPISGLREIMILKQCHHENIVR 114
            :|||:.:|||.:..||:|||..:|.|||:||:::   .:.|||:..:.||||.:|::..|.||:.
Zfish    12 YEKLDFLGEGQFATVYKARDKTTNTIVAIKKIKVGHRTEAKDGINRTALREIKLLQELSHPNIIG 76

  Fly   115 LREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLK 179
            |.:....||  :|.||.|:.|.||..::.:.|...|.:.:|...|..|:.|:|:|:.:::|||||
Zfish    77 LLDAFGHKS--NISLVFDYMETDLEVIIKDTSLVLTPANIKAYILMTLQGLEYMHNHWILHRDLK 139

  Fly   180 VSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILG 244
            .:|||:.:.|.:|:||||||:.|.:|.:..|.|:||.||||||||.|.|.:...|||||.||||.
Zfish   140 PNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA 204

  Fly   245 ELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFHMIGQS 309
            ||||..|.|.|:|::.||..|.:.||.|::.||||.:.||...:|    :|:.. ||..|:...:
Zfish   205 ELLLRVPFLAGDSDLDQLTKIFEALGTPTDEIWPGMSSLPDYVSF----KPFPG-TPLEHIFSAA 264

  Fly   310 GRNLLNI---LFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFPQHRNNAAPAPAVQPPADI 371
            |.:||.:   ||.|||.:|.||.:.||.|||                  .|...|.|..|.|...
Zfish   265 GDDLLELLRGLFTYNPCSRTTAMQALKMKYF------------------SNRPGPTPGPQLPRPN 311

  Fly   372 PISDLLN------VFIKRQR 385
            ..::.|.      :.|||:|
Zfish   312 SSTEALKEKENLLIGIKRKR 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 128/305 (42%)
S_TKc 53..337 CDD:214567 126/289 (44%)
cdk7NP_998126.2 PTZ00024 7..308 CDD:240233 132/320 (41%)
STKc_CDK7 11..308 CDD:270833 132/320 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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