DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc2rk and Cdk7

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_511044.1 Gene:Cdk7 / 31441 FlyBaseID:FBgn0263237 Length:353 Species:Drosophila melanogaster


Alignment Length:345 Identity:129/345 - (37%)
Similarity:189/345 - (54%) Gaps:29/345 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVR---MDQEKDGLPISGLREIMILKQCHHENIVR 114
            :.||:.:|||.:..||:||||.:|:|||:||::   .:..:||:..:.||||.||::..||||:.
  Fly    12 YAKLSFLGEGQFATVYKARDTVTNQIVAVKKIKKGSREDARDGINRTALREIKILQELQHENIIG 76

  Fly   115 LREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLK 179
            |  |.|...|.::.||.||.:.||..::.:.....|::.:|...:..||.|:|||..:::|||||
  Fly    77 L--VDVFGQLSNVSLVFDFMDTDLEVIIKDNKIILTQANIKAYAIMTLKGLEYLHLNWILHRDLK 139

  Fly   180 VSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILG 244
            .:|||:...|.:|:.|||||:.|.:|.:..|..:||.|||:||||.|.|.:.|.|||||.||||.
  Fly   140 PNNLLVNSDGILKIGDFGLAKSFGSPNRIYTHHVVTRWYRSPELLFGARQYGTGVDMWAVGCILA 204

  Fly   245 ELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNF-TLSQQPYNNLTPKFHMIGQ 308
            ||:|..|.:||:|::.||..|...||.|:|:.||..:.|.....| .....|.:|:   |...|.
  Fly   205 ELMLRVPFMPGDSDLDQLTRIFSTLGTPTEAEWPHLSKLHDYLQFRNFPGTPLDNI---FTAAGN 266

  Fly   309 SGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFPQ------HRNNAAPAPAVQP 367
            ...:|:..||..||..|.:..|.|...||.:.|.   |.:.|..|.      .:..|.|......
  Fly   267 DLIHLMQRLFAMNPLRRVSCREALSMPYFANKPA---PTVGPKLPMPSAILAAKEGANPQTGDTK 328

  Fly   368 PADIPISDLLNVFIKRQRME 387
            ||           :||:.:|
  Fly   329 PA-----------LKRKLVE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 121/303 (40%)
S_TKc 53..337 CDD:214567 116/287 (40%)
Cdk7NP_511044.1 PTZ00024 6..308 CDD:240233 121/303 (40%)
STKc_CDK7 11..308 CDD:270833 121/303 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442384
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.