DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and Cdk13

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_038951649.1 Gene:Cdk13 / 306998 RGDID:1311226 Length:1527 Species:Rattus norvegicus


Alignment Length:361 Identity:134/361 - (37%)
Similarity:217/361 - (60%) Gaps:17/361 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IPEQNLFGRCRPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIM 102
            |.|:::....|.|.:|:.:..:|||:||.||:|||..:.|:|||||||:|.||:|.||:.:|||.
  Rat   690 IKEKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIK 754

  Fly   103 ILKQCHHENIVRLREVVVGK--SLD------SIFLVMDFCEQDLASVLDNMSQPFTESEVKCITL 159
            ||:|..|::|:.::|:|..|  :||      :.:||.::.:.||..:|::....|.|:.:|....
  Rat   755 ILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMR 819

  Fly   160 QVLKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARMFSN-PPKPMTPQMVTLWYRAPEL 223
            |:::.|.|.|.:..:|||:|.||:|:.::|.||:|||||||::|: ..:|.|.:::|||||.|||
  Rat   820 QLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPEL 884

  Fly   224 LLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQN 288
            |||...:|.|:|:|:.|||||||...||:...|.|:|||::|..:.|:|..::||....||....
  Rat   885 LLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNT 949

  Fly   289 FTLSQQPYNNLTPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFP 353
            ....:|....|..:|..|..:..:|.:.:...:|..|.|||:.|:.::..|    .:|..||  |
  Rat   950 MKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRD----VEPSKMP--P 1008

  Fly   354 QHRNNAAPAPAVQPPAD-IPI-SDLLNVFIKRQRME 387
            ..|...|.|......|: :|: .|...::.|::|.:
  Rat  1009 PERFLHAEAMHHSKMAESLPLWQDCHELWSKKRRRQ 1044

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 123/316 (39%)
S_TKc 53..337 CDD:214567 117/292 (40%)
Cdk13XP_038951649.1 STKc_CDK12 697..998 CDD:270847 119/300 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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