DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk9

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_595616.1 Gene:cdk9 / 2540239 PomBaseID:SPBC32H8.10 Length:591 Species:Schizosaccharomyces pombe


Alignment Length:334 Identity:121/334 - (36%)
Similarity:197/334 - (58%) Gaps:20/334 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IPEQNLFGRCRPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIM 102
            :|:.:..| |..::::..:.::|||::|.||:::..:..::.|||::.|..||:|.||:.:|||.
pombe    22 VPKLHFVG-CSHLTDYHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILMHTEKEGFPITAIREIK 85

  Fly   103 ILKQCHHENIVRLREVVVGKS------LDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQV 161
            |||...||||:.|.::.|.::      ..||::|..:.:.||:.:|:|.|..|||.::||...|:
pombe    86 ILKSIKHENIIPLSDMTVVRADKKHRRRGSIYMVTPYMDHDLSGLLENPSVKFTEPQIKCYMKQL 150

  Fly   162 LKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARMFS-------NP--PKP----MTPQM 213
            ....||||.:.::|||||.:|||:.:.|.:|:|||||||:.:       ||  |.|    .|..:
pombe   151 FAGTKYLHDQLILHRDLKAANLLIDNHGILKIADFGLARVITEESYANKNPGLPPPNRREYTGCV 215

  Fly   214 VTLWYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWP 278
            ||.|||:||||||.|.:|||:|||:.|||:.|:..|:|:|.|:|::.|||.|..|.|:|:::..|
pombe   216 VTRWYRSPELLLGERRYTTAIDMWSVGCIMAEMYKGRPILQGSSDLDQLDKIFRLCGSPTQATMP 280

  Fly   279 GFADLPAVQNFTLSQQPYNNLTPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQA 343
            .:..||..:...........|...|...|:...:|...:...||..|.:|...|:.:||..||..
pombe   281 NWEKLPGCEGVRSFPSHPRTLETAFFTFGKEMTSLCGAILTLNPDERLSASMALEHEYFTTPPYP 345

  Fly   344 CDPGMMPTF 352
            .:|..:.::
pombe   346 ANPSELQSY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 120/327 (37%)
S_TKc 53..337 CDD:214567 113/302 (37%)
cdk9NP_595616.1 STKc_BUR1 27..339 CDD:270849 115/312 (37%)
S_TKc 36..339 CDD:214567 113/302 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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