DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk-5

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_499783.1 Gene:cdk-5 / 176774 WormBaseID:WBGene00000407 Length:292 Species:Caenorhabditis elegans


Alignment Length:298 Identity:118/298 - (39%)
Similarity:176/298 - (59%) Gaps:24/298 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLRE 117
            ::|:.::|||:||.|::||:..|.||||||:||:|.:.:|:|.|.||||.||::..|.|:|||.:
 Worm     4 YDKMEKIGEGTYGTVFKARNKNSGEIVALKRVRLDDDDEGVPSSALREICILRELKHRNVVRLYD 68

  Fly   118 VVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLKVSN 182
            ||  .|.:.:.||.::|:|||....|:::........:.:.||:|:.|.:.|:..::|||||..|
 Worm    69 VV--HSENKLTLVFEYCDQDLKKFFDSLNGYMDAQTARSLMLQLLRGLSFCHAHHVLHRDLKPQN 131

  Fly   183 LLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILGELL 247
            ||:...|.:|:|||||||.|..|.:..:.::||||||.|::|.|.:.:.|::|||:.|||..|:.
 Worm   132 LLINTNGTLKLADFGLARAFGVPVRCFSAEVVTLWYRPPDVLFGAKLYNTSIDMWSAGCIFAEIS 196

  Fly   248 -LGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFH------- 304
             .|:||.||.....||..|...||:|||..||....||       ..:||    |.:|       
 Worm   197 NAGRPLFPGADVDDQLKRIFKQLGSPSEDNWPSITQLP-------DYKPY----PIYHPTLTWSQ 250

  Fly   305 ---MIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVD 339
               .:...||:||..|.:.||..|..|:..|:..||.|
 Worm   251 IVPNLNSRGRDLLQKLLVCNPAGRIDADAALRHAYFAD 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 118/298 (40%)
S_TKc 53..337 CDD:214567 115/294 (39%)
cdk-5NP_499783.1 PLN00009 1..292 CDD:177649 118/298 (40%)
STKc_CDK5 3..286 CDD:143344 115/294 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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