DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk-9

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_492906.2 Gene:cdk-9 / 173023 WormBaseID:WBGene00000410 Length:478 Species:Caenorhabditis elegans


Alignment Length:390 Identity:132/390 - (33%)
Similarity:196/390 - (50%) Gaps:62/390 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QNLFGRC-----RPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLRE 100
            |.||.:.     |.||.:||||::|:|::|.|::||...:..:|||||:.|:.||:|.||:.|||
 Worm    68 QKLFDQATYPFIRDVSTYEKLNKIGQGTFGEVFKARCKNTGRMVALKKILMENEKEGFPITALRE 132

  Fly   101 IMILKQCHHENIVRLREVVVGKSLD--------SIFLVMDFCEQDLASVLDNMSQPFTESEVKCI 157
            :.:|:|..|.||..|.||...||..        :.:|||..|..|||.:|.|.....:...:|.:
 Worm   133 VKMLEQLKHPNITDLIEVCSAKSTGTTGSKDRATFYLVMALCAHDLAGLLSNPKIRMSLVHIKTM 197

  Fly   158 TLQVLKALKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARMF-----SNPPKPM-TPQMVTL 216
            ...::..|..||...::|||:|.:|:|::..|.:|:|||||||.|     ...|:|: |.::|||
 Worm   198 MKHLMSGLNKLHRSKILHRDMKAANVLISKDGILKLADFGLARPFVQRENGAGPRPLYTNRVVTL 262

  Fly   217 WYRAPELLLGCRTHTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFA 281
            |||.||||||.|.:.|.:|:|..|||:.|:...:|::.|::|..||.:|..|.|:.::.:||...
 Worm   263 WYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQGDTEQKQLQLISGLCGSINKDVWPNCV 327

  Fly   282 DLP------AVQNFTLSQQPYNNLTPKFHMI----------GQSGRN--------------LLNI 316
            ::|      :..|..|.|..|..|..|...:          ...|:|              ||.|
 Worm   328 NMPLWSAMSSEPNSALPQGKYRILPNKMKNLMKFDAPDSKTDPFGKNVKQHDSATDDDALHLLEI 392

  Fly   317 LFIYNPKTRATAEECLKS-KYFVDP-PQACDPGMMPTFPQ-----------HRNNAAPAPAVQPP 368
            |...:|..|.|::|.... .:|.|| |.|....:|.|.|.           |.|......|.|.|
 Worm   393 LLAIDPDKRPTSDEAEDDIWFFKDPVPMANVQDLMDTIPNSQFEYTVGKGAHANRGRHQNAQQRP 457

  Fly   369  368
             Worm   458  457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 123/358 (34%)
S_TKc 53..337 CDD:214567 113/328 (34%)
cdk-9NP_492906.2 STKc_CDK9 72..413 CDD:270848 116/340 (34%)
S_TKc 85..413 CDD:214567 113/327 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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