DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk-2

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001021537.2 Gene:cdk-2 / 171911 WormBaseID:WBGene00019362 Length:338 Species:Caenorhabditis elegans


Alignment Length:306 Identity:123/306 - (40%)
Similarity:186/306 - (60%) Gaps:17/306 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PEQNLFGRCRPVSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMI 103
            ||::|.||      |..|.|:|||:||:|::|...|.|...|||.:|.|::::|:|.:.||||..
 Worm     7 PERDLQGR------FCSLRRIGEGTYGVVFKAIHVRDNVKCALKMIRTDRDEEGIPSTCLREISC 65

  Fly   104 LKQCHHENIVRLREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQP----FTESEVKCITLQVLKA 164
            :|...|:|||.|.:::...|  .:::|.:|.::||.::|: |.:|    ...:.||....|:|.|
 Worm    66 IKDLQHDNIVTLFDIIYANS--KLYMVFEFIDRDLKNLLE-MLEPTNSVLPPNYVKSFMWQLLSA 127

  Fly   165 LKYLHSRFMIHRDLKVSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRT 229
            |.|.|.|.::|||||..|:|::|.|.||:|||||||.||.|.:..|.::||||||.||:|||.:.
 Worm   128 LSYCHLRRIVHRDLKPQNILVSDSGVIKIADFGLARNFSFPSRNYTHEVVTLWYRPPEILLGSQR 192

  Fly   230 HTTAVDMWAFGCILGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQ 294
            ::|::|||:.|||..|:...|||.||..||:||..|.:::|.|:...|||....|..: ....|.
 Worm   193 YSTSLDMWSLGCIFSEIASNKPLFPGECEISQLFKIFEIVGTPNIKSWPGVDSFPHYK-AVFPQW 256

  Fly   295 PYN--NLTPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFV 338
            |.|  .|.....:.| :|.::|..:..|.|:.|.||:..|..:||:
 Worm   257 PVNLKKLEETSCLTG-NGLDVLREILRYPPERRLTAKGALSHRYFL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 120/300 (40%)
S_TKc 53..337 CDD:214567 116/289 (40%)
cdk-2NP_001021537.2 STKc_CDK_like 15..300 CDD:270823 116/289 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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