DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and Cdk5

DIOPT Version :10

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_543161.1 Gene:Cdk5 / 140908 RGDID:70514 Length:292 Species:Rattus norvegicus


Alignment Length:304 Identity:130/304 - (42%)
Similarity:186/304 - (61%) Gaps:24/304 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VSEFEKLNRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVR 114
            :.::|||.::|||:||.|::|::..::||||||:||:|.:.:|:|.|.||||.:||:..|:||||
  Rat     1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

  Fly   115 LREVVVGKSLDSIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDLK 179
            |.:|:  .|...:.||.:||:|||....|:.:.......||.:..|:||.|.:.|||.::|||||
  Rat    66 LHDVL--HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLK 128

  Fly   180 VSNLLMTDKGCIKVADFGLARMFSNPPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCILG 244
            ..|||:...|.:|:|||||||.|..|.:..:.::||||||.|::|.|.:.::|::|||:.|||..
  Rat   129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193

  Fly   245 ELL-LGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYN---------NL 299
            ||. .|:||.|||....||..|..|||.|:|..||....||       ..:||.         |:
  Rat   194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLP-------DYKPYPMYPATTSLVNV 251

  Fly   300 TPKFHMIGQSGRNLLNILFIYNPKTRATAEECLKSKYFVD--PP 341
            .||   :..:||:||..|...||..|.:|||.|:..||.|  ||
  Rat   252 VPK---LNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 130/304 (43%)
Cdk5NP_543161.1 STKc_CDK5 3..286 CDD:143344 125/294 (43%)

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