DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc2rk and cdk13

DIOPT Version :9

Sequence 1:NP_523674.1 Gene:Cdc2rk / 36051 FlyBaseID:FBgn0013435 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_002940845.2 Gene:cdk13 / 100489599 XenbaseID:XB-GENE-6040279 Length:1391 Species:Xenopus tropicalis


Alignment Length:406 Identity:140/406 - (34%)
Similarity:224/406 - (55%) Gaps:48/406 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NDVDTNPAPDPQ--------APITRKGFLMSLNTGTPM-------PIPEQNLFGRCRPVSEFEKL 56
            :|:...|.|.||        :|..:|.  .|.|...|.       .|.|:.:....|.|.:|:.:
 Frog   539 SDLPLPPLPAPQSESEDVSDSPERKKN--QSRNKRRPKICGPRCGEILEKEIDWGKRCVDKFDII 601

  Fly    57 NRVGEGSYGIVYRARDTRSNEIVALKKVRMDQEKDGLPISGLREIMILKQCHHENIVRLREVVVG 121
            ..:|||:||.||:|:|..:.|:|||||||:|.||:|.||:.:|||.||:|.:|::|:.::|:|..
 Frog   602 GIIGEGTYGQVYKAKDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLNHQSIINMKEIVTD 666

  Fly   122 K--SLD------SIFLVMDFCEQDLASVLDNMSQPFTESEVKCITLQVLKALKYLHSRFMIHRDL 178
            |  :||      :.:||.::.:.||..:|::....|.|..:|....|:::.|.|.|.|..:|||:
 Frog   667 KEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNEHHIKSFMRQLMEGLDYCHKRNFLHRDI 731

  Fly   179 KVSNLLMTDKGCIKVADFGLARMFSN-PPKPMTPQMVTLWYRAPELLLGCRTHTTAVDMWAFGCI 242
            |.||:|:.::|.||:|||||||::|: ..:|.|.:::|||||.||||||...::.|:|:|:.|||
 Frog   732 KCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYSPAIDVWSCGCI 796

  Fly   243 LGELLLGKPLLPGNSEIAQLDMIIDLLGAPSESIWPGFADLPAVQNFTLSQQPYNNLTPKFHMIG 307
            ||||...||:...|.|:|||::|..:.|:|..::||....||........:|....|..:|..|.
 Frog   797 LGELFTKKPIFQANQELAQLELISRMCGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIP 861

  Fly   308 QSGRNLLNILFIYNPKTRATAEECLKSKYFVDPPQACDPGMMPTFPQHRNNAAPAPAVQPPADIP 372
            .:..:|.:.:...:|..|.|||:.|..::..|    .||..|                 .|.|:|
 Frog   862 NAALDLFDHMLALDPNKRCTAEQALLCEFLRD----VDPSKM-----------------TPPDLP 905

  Fly   373 I-SDLLNVFIKRQRME 387
            : .|...::.|::|.:
 Frog   906 LWQDCHELWSKKRRRQ 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc2rkNP_523674.1 STKc_CDK10 45..353 CDD:173742 122/316 (39%)
S_TKc 53..337 CDD:214567 116/292 (40%)
cdk13XP_002940845.2 STKc_CDK12 590..891 CDD:270847 118/300 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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