DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL42 and mrpl42

DIOPT Version :10

Sequence 1:NP_523673.1 Gene:mRpL42 / 36050 FlyBaseID:FBgn0033480 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001072400.1 Gene:mrpl42 / 779854 XenbaseID:XB-GENE-943761 Length:122 Species:Xenopus tropicalis


Alignment Length:93 Identity:38/93 - (40%)
Similarity:55/93 - (59%) Gaps:4/93 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VAVTKNGRTIVAWHPDTPVPYENTLPLPEISEIQSSAVVKESALKTAMRAFKSKHPEVARQELMQ 96
            :|:|.:|:|||.:||...||||:|.|||:...:.|.....|..||..:...|:| ||..::||.:
 Frog    31 LAMTSDGKTIVCYHPSVEVPYEHTKPLPQKDPLTSHTQTHELVLKARLNEVKAK-PEPTKEELSK 94

  Fly    97 LTHTTKHRWFPRA---RDRKAKQTPMDR 121
            :.:||||:|:|..   |.|..|..|.||
 Frog    95 MFYTTKHQWYPVGQYHRRRMKKDPPKDR 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL42NP_523673.1 MRP-S32 30..121 CDD:462999 36/91 (40%)
mrpl42NP_001072400.1 MRP-S32 29..122 CDD:462999 36/91 (40%)

Return to query results.
Submit another query.