DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL42 and Mrpl42

DIOPT Version :10

Sequence 1:NP_523673.1 Gene:mRpL42 / 36050 FlyBaseID:FBgn0033480 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_080341.1 Gene:Mrpl42 / 67270 MGIID:1333774 Length:142 Species:Mus musculus


Alignment Length:95 Identity:35/95 - (36%)
Similarity:54/95 - (56%) Gaps:5/95 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VAVTKNGRTIVAWHPDTPVPYENTLPLPEISEIQSSAVVKESALKTAMRAFKSKHPEVAR--QEL 94
            :|:|.:|||||.:||...:|||:|.|:|:...:.::....|..||..:...|||..|...  ::|
Mouse    48 LALTADGRTIVCYHPSVDIPYEHTKPIPQPDLLHNNEETHEQILKAKLEVRKSKQLEQGPMIEQL 112

  Fly    95 MQLTHTTKHRWFPRAR---DRKAKQTPMDR 121
            .::.:||||||:|..:   .||....|.||
Mouse   113 SKVFYTTKHRWYPHGQYHNRRKKLNPPRDR 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL42NP_523673.1 MRP-S32 30..121 CDD:462999 33/93 (35%)
Mrpl42NP_080341.1 MRP-S32 46..142 CDD:462999 33/93 (35%)

Return to query results.
Submit another query.