DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL42 and mrpl42

DIOPT Version :10

Sequence 1:NP_523673.1 Gene:mRpL42 / 36050 FlyBaseID:FBgn0033480 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001314748.1 Gene:mrpl42 / 568235 ZFINID:ZDB-GENE-101014-1 Length:144 Species:Danio rerio


Alignment Length:124 Identity:49/124 - (39%)
Similarity:67/124 - (54%) Gaps:16/124 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FRLFSSSAVQRNAVGGKSL-----VEAVAVTKNGRTIVAWHPDTPVPYENTLPLPEISEIQSSAV 69
            ||....|:|.::.|||.|:     || :|||.:|.|||.:||...||||.|.|:.....|...|.
Zfish    25 FRGLFLSSVSKSTVGGSSIHDDSNVE-IAVTSDGNTIVCFHPADDVPYELTQPIVRPDAISGHAE 88

  Fly    70 VKESALK----TAMRAFKSKHPEVARQELMQLTHTTKHRWFP--RARDRKAK-QTPMDR 121
            ..|..||    .|:.|.| |.|.:  :||.::.:||||||:|  :..:|:.| ..|.||
Zfish    89 THEQVLKDRLGKAVLADK-KAPTI--EELSKMFYTTKHRWYPVGQFHNRRRKLNPPKDR 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL42NP_523673.1 MRP-S32 30..121 CDD:462999 38/97 (39%)
mrpl42NP_001314748.1 MRP-S32 49..144 CDD:462999 39/98 (40%)

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