DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL42 and Mrpl42l1

DIOPT Version :10

Sequence 1:NP_523673.1 Gene:mRpL42 / 36050 FlyBaseID:FBgn0033480 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001395979.1 Gene:Mrpl42l1 / 103691922 RGDID:9333559 Length:141 Species:Rattus norvegicus


Alignment Length:95 Identity:36/95 - (37%)
Similarity:52/95 - (54%) Gaps:6/95 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VAVTKNGRTIVAWHPDTPVPYENTLPLPEISEIQSSAVVKESALKTAMRAFKSKHPEVAR--QEL 94
            :|:|.:|||||.:||...||||:|.|:|....:.::....|..|:|.:.. ..||.|...  ::|
  Rat    48 LALTSDGRTIVCYHPSVDVPYEHTKPIPHPDLLHNNEETHEQILRTKLEG-NHKHLEQGPMIEQL 111

  Fly    95 MQLTHTTKHRWFPRA---RDRKAKQTPMDR 121
            .::..||||||:|..   |.||....|.||
  Rat   112 SKVFFTTKHRWYPHGQYHRCRKKLNPPKDR 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL42NP_523673.1 MRP-S32 30..121 CDD:462999 34/93 (37%)
Mrpl42l1NP_001395979.1 MRP-S32 46..141 CDD:462999 34/93 (37%)

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