DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-N and CG5342

DIOPT Version :9

Sequence 1:NP_610549.1 Gene:PIG-N / 36049 FlyBaseID:FBgn0033479 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_650088.2 Gene:CG5342 / 41389 FlyBaseID:FBgn0037916 Length:837 Species:Drosophila melanogaster


Alignment Length:894 Identity:264/894 - (29%)
Similarity:445/894 - (49%) Gaps:126/894 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVVHVLLLGSIFVIYFRSPVITGLTPQ--KHLLYYGLEPPANRLVLIVTDGFRADSFFEENCRYV 69
            ::..:|||.::.:||.||.....|.||  :||..   .|||:|||::|.||..|.||....|..|
  Fly     9 VLFQLLLLFAVVLIYLRSTYPGSLEPQEVEHLKE---PPPADRLVVLVRDGLSAQSFLANRCTNV 70

  Fly    70 PNLRKIFLREGVVGVSRTRVPT-ETRPGHITLIAGLYEDPSAVLRGWKSNPIDFDTVFNRSSQTY 133
            |.||::||.:|:||:||....| .:...:|:|.:|..||.::|.|||...|...|::|:|..:::
  Fly    71 PLLRELFLHQGLVGISRPETITYHSISPYISLFSGFNEDAASVARGWLGTPASIDSIFDRCKRSF 135

  Fly   134 AWGANDVLNVFSHVSNGGEINLRFYNHDLDFSPGYDAYEEDEWVFKRVKLLLQQKREALQRAQNV 198
            ||...::::.|..:....|::...|...:..|    ..|.:::|.:.|:..|......|.....|
  Fly   136 AWTTTELISRFPKIERPRELSFETYGEGVTKS----CSEMEDFVCRSVQRFLGGGSRLLLNTTGV 196

  Fly   199 VFFLHLLGLDTAGHVHKPGAPKFRRTLEKTEKGVYAIYQEFERVFPDKRTAYLLTADHGMTDSGA 263
            :||:|:.|::       |..    .:|::.::.|:.:|:.||:.|||:|||||.|::.|...:.:
  Fly   197 IFFIHMTGVE-------PSC----ESLQRIQENVWNVYKSFEKTFPDQRTAYLFTSNLGDPQTKS 250

  Fly   264 HGSGSPHETDTPFMLWGAGASRAVPKPGGRTFMPNNEGPAMPLHELEQAQLTPLMSALLGLAPPM 328
            ..|.:   .::||.|||:|.:.....| ||:||.|..|..:|||.|....||.|||||||:.||:
  Fly   251 EYSLA---VESPFFLWGSGVNHIKSMP-GRSFMANEAGLRLPLHVLNTPHLTALMSALLGVPPPV 311

  Fly   329 NNFGKLPLGYLNVSKEYEAMAAHVNALQLLEQYVALQKQHKK---GFFADILLEYDVLNAEAIKR 390
            .:.|.||.|.||.|..|||.|..:||.|||.|...|::.|.|   .|:         |:.:.:..
  Fly   312 YSRGMLPKGMLNASLRYEANAMLINAKQLLAQARRLRELHPKRMPAFW---------LSFQMMDN 367

  Fly   391 YKDTIVQLQKKREYSLCIDKSQVIMSQALEGIDYYHGYYRRVLLLSTTSTFLGWMFYIYRLLS-- 453
            :....:.|:|:|.:...:|.|...|...::|:||:..|||.|.:.:.:...:.|::.:...|:  
  Fly   368 FVKESLALKKQRRFRALLDYSCNYMPVLIKGMDYFKDYYRHVSITAVSFAGIAWIYCLRCHLTVG 432

  Fly   454 ---RNRASKVELVLERSNKIVRV----SIVSSVIVLIICLLSQGTPLDISFYLLLPYFVW---LK 508
               ||.....|::  .|.::|..    .:::.|:|:|:.|  :..||.:...||:|...|   ||
  Fly   433 KKCRNLIEIQEVI--SSKRLVYARGFHRLLTGVLVIIMML--ERIPLVVQAILLIPSLYWRTTLK 493

  Fly   509 ALQPWNINFSSSPASAYSVPALQTSMWQLVLLIACAELMVFTFFERRLIALCFCVFACYNSWENF 573
            .|       ...|........:.|::..|:....        ||.|.::|:.:..||.||:.|.|
  Fly   494 IL-------GERPKMVCRKSLMSTALLALICFGG--------FFRRYILAVGYLGFASYNNREAF 543

  Fly   574 QWKSRDFFSWLALVLILSCFPLLPLSVG-YQNGYLLGAGVIVIFTNSFWNSKSRLCYRNHTKYSN 637
            :.:...|:.||.|:|.|:....||.|:| .|.|.|:                          :|.
  Fly   544 KRRGHQFYLWLLLLLGLTVVSALPESLGCSQPGALM--------------------------FSI 582

  Fly   638 ALILLQTILCAYLHSNGI----NIPIPLK---------------LASWLYLVYAFASILLSKESR 683
            .|.:|:.:.|. ::.|.:    |||:.|.               |.||:||.:      |....|
  Fly   583 FLTVLRPLACG-VYLNLLTWLSNIPVLLAALEYILIGWHPWIMYLVSWIYLGF------LVLWQR 640

  Fly   684 LDLRLAQI-GFNLGSLYATLCTSYEAVFVQLLTIELNISLRAQSARAER-SVLRLAFTLLLYTFF 746
            .:|:.::: .|:|.:||...|||||:|.:|:|.:||.::||.:..|.|. .....|..:|:|:::
  Fly   641 RNLQASEVFFFDLSTLYTLTCTSYESVVIQMLAMELQLALRMKLKRNESIGPKTAAHYILVYSWY 705

  Fly   747 SLFGSGNIASISSF-DPNIARCYLSHFAPFVIMGLVLLKLLVPVVLIMSVIYANSEFVRQHEEQI 810
            |||..|:..:...| |.....|:  .::|.....:::|||::|.:|::.::..|.:.:..:|:||
  Fly   706 SLFIIGSFPAFDDFLDILHETCF--GYSPLTYGLVMVLKLILPWLLVLCIMAGNYKSLASYEQQI 768

  Fly   811 FICLLLICDVMGLNFLFLVRNQGSWLDIGTSISHFVIMEVTTLVMLVIF 859
            |:.|||:...|.|..|..:.|.|.|.||.:..:.|.::.|..||.|:::
  Fly   769 FVRLLLMNSAMSLVLLHGITNVGPWRDILSRFAEFAVVHVFPLVWLLLW 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-NNP_610549.1 Npp1 10..>265 CDD:224441 82/257 (32%)
GPI_EPT_1 42..335 CDD:293744 100/293 (34%)
PigN 421..834 CDD:282796 116/447 (26%)
CG5342NP_650088.2 GPI_EPT_1 43..318 CDD:293744 100/293 (34%)
PigN 398..781 CDD:282796 113/436 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470305
Domainoid 1 1.000 119 1.000 Domainoid score I1899
eggNOG 1 0.900 - - E1_COG1524
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1579
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141925at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47052
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12250
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.800

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