DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-N and Pigg

DIOPT Version :9

Sequence 1:NP_610549.1 Gene:PIG-N / 36049 FlyBaseID:FBgn0033479 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_003751363.1 Gene:Pigg / 100910143 RGDID:1560335 Length:986 Species:Rattus norvegicus


Alignment Length:1058 Identity:218/1058 - (20%)
Similarity:372/1058 - (35%) Gaps:286/1058 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ALVVHVLLLG-SIFVI-YFRSPVITGLTPQKHLLYYGLEPPA-------------------NRLV 49
            |..|.:.::| :||:. :|.:||.:...|:     :|.|.||                   :::|
  Rat    10 ASCVAIEVIGVAIFIRGFFPAPVRSSARPE-----HGAETPAPEPVAGVSSNWTKLPPPLFSKVV 69

  Fly    50 LIVTDGFRADSFF-EENCRYVPNLRKIFLREGVVG--VSRTRVPTETRPGHITLIAGLYEDPSAV 111
            :::.|..|.|..| .:..:|:| .....:.:|...  |:..:.||.|.|....|:.|.......|
  Rat    70 IMLIDALRDDFVFGSKGVKYMP-YTTYLVEKGASHSFVAEAKPPTVTMPRIKALMTGSLPGFVDV 133

  Fly   112 LRGWKSNPIDFDTVFNRSSQTYAWGANDVLNVFSHVSNGGEINLR-FYNH--DLDFSPGY---DA 170
            :|...|..:..|.|..   |..|.|...:.       .|.|..:: |..|  :.|.:..:   |.
  Rat   134 IRNLNSPVLLEDNVIR---QAKAAGKRIIF-------YGDETWVKLFPKHFVEYDGTTSFFVSDY 188

  Fly   171 YEEDEWVFKRVKLLLQQKREALQRAQNVVFFLHLLGLDTAGHVHKPGAPKFRRTLEKTEKGVYAI 235
            .|.|..|.:.:.       :.|:|....|..||.||||..||:..|.:|.....|.:.:..:..|
  Rat   189 IEVDNNVTRHLD-------KVLRRGDWDVLILHYLGLDHIGHISGPNSPLIGHKLSEMDSVLMKI 246

  Fly   236 Y-----QEFERVFPDKRTAYLLTADHGMTDSGAHGSGSPHETDTPFMLWGAGASRAVPKPGGRTF 295
            :     ::.|.:.|   :..:|..||||:::|:||:.|..|..||.:|..:...|   |||    
  Rat   247 HTSLLSKDRETLLP---SLLVLCGDHGMSETGSHGASSTEEVSTPLLLISSAFER---KPG---- 301

  Fly   296 MPNNEGPAMPLHELEQAQLTPLMSALLGLAPPMNNFGKLPLGYLNVSKEYEAMA-AHVNALQL-- 357
                 ....|.| ::|..|...::..|||..|.:|.|.|....:...:..|.:. .|:|.|||  
  Rat   302 -----DVRHPKH-VQQTDLAATLAIGLGLPIPKDNVGSLLFPVIEGKQMREQLRFLHLNTLQLSK 360

  Fly   358 --------------LEQYVALQ-------KQHKKGFFADILLEYDVLNAEAIKRYKDTIVQLQKK 401
                          .||:...:       |.|.:...:||||.   |..:.:::|...:..|.:.
  Rat   361 LLQENIPAYEKDPGFEQFKMAERLHGNWVKLHLEENHSDILLG---LGTKVLRQYLGALKTLSQS 422

  Fly   402 RE--------YSLCIDKSQVIMSQALEGIDYYHGYYRR----VLLLSTTSTFLGWMFY-----IY 449
            ..        ||:.:....|:....|..:...|...|:    |.|||...:.|.::.:     |:
  Rat   423 LSTQVAHYDIYSMAVGTLMVLEVLTLFLLSTPHVLCRKAELDVPLLSPVFSLLFYLIFLVLSAIH 487

  Fly   450 RLLSRNRASKVELV----LERSNKIVRVS-IVSSVIVLIICLLSQGTPL------------DISF 497
            .|:..:..|...|.    |.....:|.|| :..:::..:|.:::.||.|            :::.
  Rat   488 VLVCTSSESSCYLCNLPWLAAGAVMVLVSALFCAILSALIRMVTDGTLLRKNATVASSGWSEVNL 552

  Fly   498 YLLLPYFVWLKALQPWNINFSSSPASAYSVPALQTSMWQLVLLIACAELMVFT---FF------- 552
            .|||.....:.:|          .||::.....||  |..::...|..|...|   :|       
  Rat   553 LLLLGTVGHVLSL----------GASSFVEEEHQT--WYFLINTLCLALSQETCRSYFLGDDCEP 605

  Fly   553 ------ERRLIALCFCVFAC------------------------YNSWENFQWKSRDFFSWLALV 587
                  |::    |..|.||                        ..:..:.:|       |..|.
  Rat   606 QHHFQVEQK----CVNVLACTLQDSTSCSTPESESDTAGKRASLLEAHRSCKW-------WTVLA 659

  Fly   588 ---LILSCFPLLPL--SVGYQNGYLLGAGVIVIFTNSFWNSKSRLCYRNHTKYSNALILLQTILC 647
               |:|.|..||..  ..|.|..:....        |.|.:.|     :|..:.:.|..|..::.
  Rat   660 SPWLVLICCRLLRSLNQTGVQGAHRPDF--------SHWLTSS-----DHKVHLSGLAALSLVVI 711

  Fly   648 AYLHSNGINIPIPLKLASWLYLVYAFASIL-------------LSKESRLDLRLAQIGFNLGSLY 699
            ..|...|.::...:.||..|..|:.:.:.:             :|| ...:.|...: |.||.|:
  Rat   712 FILVQKGCSLVSKVALALGLLGVFCYRAAIGIVLFPWQPDNKGISK-GITEARFVYV-FVLGILF 774

  Fly   700 A---------TLCTSYEAVFVQLLTIELNISLRAQSARAERSVLRLAFTLLLYTFFSLF------ 749
            .         .:...::...|.|..|...:.|.|.......::..|||:||:.|..:.|      
  Rat   775 TGTKDLLKAQVIAADFKTKIVGLWEIHSGLVLLAALLLRPHNLPVLAFSLLIQTVMTKFIWKPLR 839

  Fly   750 ----------------------GSGNIASISSFDPNIARC-----YLSHFAPFVIMGLVLLKLLV 787
                                  .|.|||:|..    .|.|     |:...|.|:   .|....:.
  Rat   840 HDAAEVTVMHYWFGQAFFYFQGNSNNIATIDI----SAGCVGLETYMEVPATFL---TVFGTYVG 897

  Fly   788 PVVLIMSVIYANSEFVRQHE--EQIFICLLLICDVMGLNFLFLVRNQGSWLDIGTSISHFVIME- 849
            ||:....::|..|.......  .:...|..|||.|....::.||.:....|.|.:..|..::.| 
  Rat   898 PVLWASHLVYFLSSEGNNGSALSRACFCYALICSVPVATYIVLVTSLRYHLFIWSVFSPKLLYEG 962

  Fly   850 ---VTTLVMLVIFYTAKQ 864
               :.|..:..:|....|
  Rat   963 MHLLITAAICAVFTATNQ 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-NNP_610549.1 Npp1 10..>265 CDD:224441 66/289 (23%)
GPI_EPT_1 42..335 CDD:293744 79/325 (24%)
PigN 421..834 CDD:282796 100/540 (19%)
PiggXP_003751363.1 GPI_EPT_2 62..335 CDD:293748 76/306 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1524
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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