DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-N and pigg

DIOPT Version :9

Sequence 1:NP_610549.1 Gene:PIG-N / 36049 FlyBaseID:FBgn0033479 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_005173129.1 Gene:pigg / 100538291 ZFINID:ZDB-GENE-141215-6 Length:972 Species:Danio rerio


Alignment Length:1122 Identity:226/1122 - (20%)
Similarity:354/1122 - (31%) Gaps:420/1122 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YALVVHVLLLGSIFVI---YFRSPVITGLTPQKHLLYYGLEP------------PA---NRLVLI 51
            :||:..:|.:.||.:.   :|..||.:..:.:..:.....||            ||   .|:|::
Zfish     8 FALLCLILEIVSIALFLRGFFPVPVKSSFSAKSKVTDIPAEPQTGNNAVNSSRAPALLFKRVVIV 72

  Fly    52 VTDGFRADSFFEEN-CRYVPNLRKIFLREGVVG--VSRTRVPTETRPGHITLIAGLYEDPSAVLR 113
            :.|..|.|..|..| .|::|..|.: :.:|...  :::.|.||.|.|....|..|          
Zfish    73 LIDALREDFVFSSNGRRFMPYTRHV-VEKGSSHSFIAKARPPTVTMPRIKALTTG---------- 126

  Fly   114 GWKSNPIDFDTVFNRSSQTYAWGANDVL---NVFSHVSNGGEINLRFYNHDLDFSPGYDAYEEDE 175
               |.|...|.|.|.:|        .||   |:.....:.|: .:.||.             :|.
Zfish   127 ---SIPGFIDVVMNLNS--------PVLLEDNLIWQAKSAGK-RIIFYG-------------DDT 166

  Fly   176 WVFKRVKLLLQQK---------------------REALQRAQNVVFFLHLLGLDTAGHVHKPGA- 218
            ||....|..::|.                     ...|:|....:..||.||||..||:..|.: 
Zfish   167 WVRLFPKHFMEQDGTTSFFVSDYTEVDNNVTRHLDSTLKRDDWDILILHYLGLDHIGHISGPHSS 231

  Fly   219 ---PKFRRTLEKTEKGVYA--IYQEFERVFPDKRTAYLLTADHGMTDSGAHGSGSPHETDTPFML 278
               ||... ::...|.::|  |.:|.|...|:   ..::..||||:::|:||..|..|.:|..:|
Zfish   232 LIGPKLME-MDDIIKKIHASLISKESEGTLPN---LLVVCGDHGMSETGSHGGSSEQEINTALVL 292

  Fly   279 WGAGASRAVPKPGGRTFMPNNEGPAMPLHELEQAQLTPLMSALLGLAPPMNNFGKL-PLGYLNVS 342
            ......|.|          ..|.||:    :||..|.|.::..|||....|:.|:| |..:..:|
Zfish   293 ISPAFRRKV----------GLERPAV----VEQVDLAPTLALGLGLPISQNSVGRLIPAVFEELS 343

  Fly   343 KEYEAMAAHVNALQL----------------LEQYVALQKQHKK-------GFFADILLEYDVLN 384
            ...:.....:|..||                .||:...:|.|..       |..:::|..   :.
Zfish   344 MREQLRMLQINGHQLSQLLQDSNPVFHKEDGYEQFRVAEKAHGSWMKLYVDGNKSEVLSN---MG 405

  Fly   385 AEAIKRYKDTIVQLQKKREYSLCIDKSQVIMSQALEGIDYYHGYYRRVLLLSTTSTFLGWMFYIY 449
            .:..|:|.|.:                 ..||.||......:..|..::.:    ||:..:.::.
Zfish   406 KKVRKQYLDAL-----------------KAMSSALSKQMGKYDLYSMIIAM----TFILQVLFLL 449

  Fly   450 RLLSRNRASKVELVLERSNKIVRVSIVSSVIVL---IICLL----------SQGTPLDISFYLLL 501
            .|......|:        :.:|.|.:.||::.|   ::||.          |.|.|         
Zfish   450 LLAMPEALSR--------DAVVDVPLASSLLSLPFYLLCLFGSALHVLVCTSAGGP--------- 497

  Fly   502 PYFVWLKALQPWNINFSSSPASAYSVPAL----------------QTSMWQL----VLLIA---- 542
               .:|.:| ||.:.||....|:....||                ::|.|.|    .||:.    
Zfish   498 ---CYLCSL-PWVLVFSVILLSSAFTCALVGMAARRLPTSNKTPTKSSGWALSELDALLLTGTVF 558

  Fly   543 -CAELMVFTFFERR-------LIALCFCVFACYNSWENFQWKSRDFF------------------ 581
             ...|...:|.|..       |..||..|         ||...|.:|                  
Zfish   559 HTLSLGSSSFIEEEHQTWYFLLNTLCLAV---------FQDVCRRYFREQRQGGEEEDEGPLLPS 614

  Fly   582 ---------------------SWLAL---VLILSCFPLLPL--SVGYQNGYLLGAGVIVIFTNSF 620
                                 .||||   :|.|:|..||..  ..|.|..:|...|        .
Zfish   615 ASDAGLSFSPALELGVSAGSEKWLALGTPLLTLTCCRLLRALNQTGVQWAHLPDFG--------H 671

  Fly   621 WNSKSRLCYRNHTKYSNALILLQTILCAYLHSNGINIPIPLKLASWLYLVYAFASILLSKESRLD 685
            |.:..     :|..:.:.|..:..:|.                   |.||....|::    |::.
Zfish   672 WLNSG-----DHKVFLSVLAAVSLLLI-------------------LVLVQRHCSLV----SKIA 708

  Fly   686 LRLAQIGFNLGSLYATLCTSYEAVFVQLLTIELNISLRAQSARAERS-----VLRLAFT-----L 740
            |.|..:|     :|     ||.|....:|....:.|.:......|..     ||.:.||     |
Zfish   709 LTLGLLG-----VY-----SYRAAVGNVLFPWPHSSRQVSKGTVEARFVYVFVLGILFTGVKDLL 763

  Fly   741 LLYTFFSLFGSGNIASISSFDPNIARCYLSHFAPFVIMGLVLLKLLVPVVLIMSVIYANSEFVRQ 805
            ......|...||.:.|...::              |..|:|||..|:               .|.
Zfish   764 RSQVMSSAVDSGRLKSRGLWE--------------VYSGVVLLVALL---------------FRA 799

  Fly   806 HEEQIFICLLLICDVM----------------------GLNFLFLVRNQGSWLDIGT-------- 840
            |......|.||:..:|                      |..|.:.   ||:..:|||        
Zfish   800 HNLPTLACCLLVQTIMAQFIWKKLHYDAAQTTIMHYWFGQAFFYF---QGNSNNIGTVDISVGFV 861

  Fly   841 SISHFVIMEVTTLVML------------VIFYTAKQ----------------LLRVIP--WEEID 875
            .:..:|......|..|            ::.|.:.|                |||.||  :..:.
Zfish   862 GLESYVEAPAIILTALSTYAGPLLWACHLLCYLSSQTDRVVNGLGHGSYCFALLRSIPAVFYVVL 926

  Fly   876 FKMLPLRLIHWDVISAK 892
            ...|...|..|.|.|.|
Zfish   927 VTALRYHLFIWSVFSPK 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-NNP_610549.1 Npp1 10..>265 CDD:224441 69/305 (23%)
GPI_EPT_1 42..335 CDD:293744 84/341 (25%)
PigN 421..834 CDD:282796 96/533 (18%)
piggXP_005173129.1 Npp1 28..>286 CDD:224441 69/297 (23%)
GPI_EPT_2 66..335 CDD:293748 79/322 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1524
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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