DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-N and pign

DIOPT Version :9

Sequence 1:NP_610549.1 Gene:PIG-N / 36049 FlyBaseID:FBgn0033479 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_002934435.2 Gene:pign / 100497214 XenbaseID:XB-GENE-960725 Length:929 Species:Xenopus tropicalis


Alignment Length:963 Identity:333/963 - (34%)
Similarity:495/963 - (51%) Gaps:119/963 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVVHVLLLGSIFVIYFRSPVITGLTPQKHLLYYGLEPPANRLVLIVTDGFRADSFFE----ENCR 67
            |.||::...|||.|||.||::.|:||.    :..|.|||.||||.|.||.|||:|||    |..|
 Frog     9 LAVHLVFFTSIFDIYFTSPLVHGMTPH----HTSLPPPAKRLVLFVADGLRADTFFELDENETSR 69

  Fly    68 YVPNLRKIFLREGVVGVSRTRVPTETRPGHITLIAGLYEDPSAVLRGWKSNPIDFDTVFNRSSQT 132
             .|.||.|....|..|||.||||||:||||:.||||.|||.|||.:|||.||::||::||.|..|
 Frog    70 -APYLRNIIETRGSWGVSHTRVPTESRPGHVALIAGFYEDVSAVAKGWKENPVEFDSIFNESKFT 133

  Fly   133 YAWGANDVLNVFSHVSNGGEINLRFYNHDLDFSPGYDAYEEDEWVFKRVKLLLQ--QKREALQRA 195
            ::||:.|:|.:|:..::|..|....|:.:.:.....||.:.|.|||:.:|....  ...:.|.|.
 Frog   134 WSWGSPDILPMFAKGASGDHIFTHCYSANSEDFASDDATKLDTWVFEHLKAFFSSAHSNQTLLRK 198

  Fly   196 QN---VVFFLHLLGLDTAGHVHKPGAPKFRRTLEKTEKGVYAIYQEFERVF-PDKRTAYLLTADH 256
            .|   :|||||||||||.||.||||:.:::..::|.:||:..:....|..: .|..|||:||:||
 Frog   199 LNEEKIVFFLHLLGLDTNGHAHKPGSREYKENVKKVDKGIKEVALLLEDFYGNDNNTAYILTSDH 263

  Fly   257 GMTDSGAHGSGSPHETDTPFMLWGAGASRAVPKPGGRTFMPNNEGPAMPLHELE-----QAQLTP 316
            ||||.|:||:|.|.||.||.:.||||    |..|.......:.:..|..|..|:     ||.:.|
 Frog   264 GMTDWGSHGAGHPSETLTPLVAWGAG----VRYPTKVQEQSDKQSKAWKLEHLKRNDVNQADVAP 324

  Fly   317 LMSALLGLAPPMNNFGKLPLGYLNVSKEYEAMAAHVNALQLLEQYVALQKQHKKG----FFADIL 377
            ||::|:|:..|:|:.|.||..|||.|:.::|.:...||||:|||:.....|.|:.    .|:...
 Frog   325 LMASLIGIPYPLNSVGILPGEYLNNSELFKAESMLTNALQILEQFKVKMAQKKETTLPFLFSPFS 389

  Fly   378 LEYDVLNAEAIKRYKDTIVQLQKKREYSLCIDKSQVIMSQALEGIDYYHGYYRRVLLLSTTSTFL 442
            |..|....:.:::.:..|.:...|...:||    :.::..||.|:.|||.|.|..|.:|..:.|.
 Frog   390 LLSDSKQLDILRKTRSYIHRENYKEAMALC----ENLIDLALRGLAYYHTYDRFFLGISVFAGFS 450

  Fly   443 GWMFYIYRLLSRNRA--SKVELVLERSNKIVRVSIVSSV-IVLIICLLSQGTPLDISFYLLLPYF 504
            ||:.|:..::.|...  :|..|.|.:....|....||:: |.:||.|.||..|.....|.|||..
 Frog   451 GWISYVILVILRTNTGITKDSLKLNKEKTSVAQYAVSALGIFIIIFLKSQSCPWTYYIYCLLPIP 515

  Fly   505 VWLKALQPWNI--NF-----SSSPASAYSVPALQTSMWQLVLLIACAELMVFTFFERRLIALCFC 562
            ||....:.|.|  |.     |.||......         |.:.....|::|.:||.|.::.:...
 Frog   516 VWYAVSKEWYILCNLTDCLQSLSPLRIVGF---------LTVTFMGIEVLVLSFFYRSILTVGLI 571

  Fly   563 VFACYNSWENFQWKSR-DFFSWLALVLILSCFPLLPLSVGYQNGYLL--GAGVIVI---FTNSFW 621
            .|||:........::: ....|:.|.|:|:.|||:|: ||.:....|  .||::.:   ..:..|
 Frog   572 AFACWPVVMQISTQAKITTLIWVFLCLLLAVFPLMPV-VGKEPNITLVTTAGLLALLISLVSCLW 635

  Fly   622 -----NSKSRLCYRNHTKYSNALILLQTILCAYL----HSN---GINIPIPLKLASWLYLVYAFA 674
                 .:||.   .|..|..:...:|..||..|:    ||:   ...:|:..::.||..|..|..
 Frog   636 VIYKRKNKSA---GNIDKMVHVCQMLILILAMYIVNTTHSSLAAKQGLPLINQIVSWTVLASALV 697

  Fly   675 SILLSKESRLDLRLAQIGFNLGSLYATLCTSYEAVFVQLLT--------------IELNISLR-- 723
             :.|...:.|..||..|..:|.|.|..|.|.|||:|..:|:              ::..:|.:  
 Frog   698 -VPLCTTAVLFQRLLSIFLSLMSTYLLLSTGYEALFPLVLSCLMCTWIYIEQGTLVKYGLSFKYM 761

  Fly   724 ----------AQSARAERSVLRLAFTLLLYTFFSLFGSGNIASISSFDPNIARCYLSHFAPFVIM 778
                      .||.:.....:|.:|.|:.:...:.||:||||||:||||....|:|:.|:|||:.
 Frog   762 LNGIDFSPEITQSRQLNLDDIRRSFFLVFFIITAFFGTGNIASINSFDPASVYCFLTVFSPFVMG 826

  Fly   779 GLVLLKLLVPVVLIMSVIYANSEFVRQHEEQIFICLLLICDVMGLNFLFLVRNQGSWLDIGTSIS 843
            ||::.|:|:|.||:|..........:...:.:|:.:|:|.|:|.|:|.|||::.|||||||||||
 Frog   827 GLMMWKILIPFVLVMCAFETVQISAQISSKCLFLIVLVITDIMSLHFFFLVKDYGSWLDIGTSIS 891

  Fly   844 HFVIMEVTTLVMLVIFYTAKQL--LRVIPWEEIDFKMLPLRLIHWDVISAKHH 894
            ||||:..||:.::::......|  .::|||.:                 .|||
 Frog   892 HFVIVMSTTIFLMLLSGLVHYLTTTKIIPWRQ-----------------KKHH 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-NNP_610549.1 Npp1 10..>265 CDD:224441 122/264 (46%)
GPI_EPT_1 42..335 CDD:293744 136/307 (44%)
PigN 421..834 CDD:282796 133/466 (29%)
pignXP_002934435.2 GPI_EPT_1 40..343 CDD:293744 136/307 (44%)
PigN 429..882 CDD:398585 133/466 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 152 1.000 Domainoid score I4289
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6330
Inparanoid 1 1.050 480 1.000 Inparanoid score I1432
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141925at33208
OrthoFinder 1 1.000 - - FOG0004928
OrthoInspector 1 1.000 - - oto102631
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2480
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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