DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and Smoc1

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001139689.1 Gene:Smoc1 / 64075 MGIID:1929878 Length:463 Species:Mus musculus


Alignment Length:614 Identity:132/614 - (21%)
Similarity:206/614 - (33%) Gaps:236/614 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PACAAKQGECDDNEGPVCGTDGQTYPTRCHLLRAQCGGHQVSLKYSGSC-----NAC----LEAV 84
            |.|...|.:      |:|.:||::|.:.|...||:|....:::.:.|.|     :.|    .:|:
Mouse    44 PHCPRTQPK------PICASDGRSYESMCEYQRAKCRDPALAVVHRGRCKDAGQSKCRLERAQAL 102

  Fly    85 KFARRQQERDPGYFVPRCRKDGNFAAMQCYGNNG-CWCSDSQGRPIADDNKQFRRKGKLRCRANR 148
            :.|::.||   ..|||.|.:||:|..:||:...| |||....|:||:..:.|             
Mouse   103 EQAKKPQE---AVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQ------------- 151

  Fly   149 RDRRRLASHQIGYNPDTSASKGSS--EAGSTAHRTCSKSDRSQFNTNLMRMFRNEAQSFF----- 206
             ::..:.|   |...|...|:|:|  :.......|.:..|.|:....:      |.|..|     
Mouse   152 -NKTPVCS---GPVTDKPLSQGNSGRKVSFRFFLTLNSDDGSKPTPTM------ETQPVFDGDEI 206

  Fly   207 RQPSLSDSHILEWQFSKLDTNGNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKYCDVTKDANLNW 271
            ..|:|...|:                                              |.||:.|| 
Mouse   207 TAPTLWIKHL----------------------------------------------VIKDSKLN- 224

  Fly   272 LEWSVCFTKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTGVNPHSYSED 336
                                                  ||||....:.|                
Mouse   225 --------------------------------------NTNVRNSEKVH---------------- 235

  Fly   337 ASGSEEHEDNYEDSATGYGGEEDDSQGADLPSSRTHIPSLYMLNSKPETASQDLENDSNCWMDQS 401
                                                                      :|..::.
Mouse   236 ----------------------------------------------------------SCDQERQ 242

  Fly   402 VTLEEQGHGGKSVLFVPQCLPDGRYQRIQCYSSTSTSYCWCVNEDTGKSIPGTSVKNKRPQC--- 463
            ..|||.....:..:.:|:|.|.|.|:.:||:.  ||.|||||..|||:.:||||.:...|.|   
Mouse   243 SALEEARQNPREGIVIPECAPGGLYKPVQCHQ--STGYCWCVLVDTGRPLPGTSTRYVMPSCESD 305

  Fly   464 --------DESVAVRPMKGCTEPRKTQFLKELKAYLNTSLL----PSSTTG----SNSSMWKTDD 512
                    |:....|.:.||.|.:|.:|:..|...|.|.::    .::.||    |......|.:
Mouse   306 ARAKSIEADDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLE 370

  Fly   513 ERIATLSFVYLDKNKNKSWDRREWKNFRDLVTSASHLRRCGKKMPRYCDVNGDKKISLAEWLNCL 577
            ||:|...|..||.|.:...::||.|.|:..|...:..::|.::...|||:|.||.|||.|...||
Mouse   371 ERVAHWYFSQLDSNSSDDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGCL 435

  Fly   578 QATPRESATTAKPAQSNETASPKFQGVNP 606
            ..:....:..:.|       ..|..|.||
Mouse   436 GVSKEGGSLGSFP-------QGKRAGTNP 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 10/38 (26%)
TY 88..139 CDD:238114 19/51 (37%)
SPARC_Ca_bdg 180..274 CDD:287550 14/98 (14%)
SPARC_EC <219..281 CDD:238155 5/61 (8%)
TY 396..463 CDD:238114 26/66 (39%)
Smoc1NP_001139689.1 KAZAL 42..86 CDD:197624 13/47 (28%)
Thyroglobulin_1 94..157 CDD:278514 22/79 (28%)
Thyroglob_assoc 158..227 CDD:293205 21/162 (13%)
TY 236..302 CDD:238114 26/67 (39%)
SPARC_EC <374..435 CDD:238155 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848460
Domainoid 1 1.000 59 1.000 Domainoid score I10614
eggNOG 1 0.900 - - E1_KOG4578
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 199 1.000 Inparanoid score I3783
Isobase 1 0.950 - 0 Normalized mean entropy S7093
OMA 1 1.010 - - QHG47194
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004129
OrthoInspector 1 1.000 - - otm44353
orthoMCL 1 0.900 - - OOG6_109000
Panther 1 1.100 - - LDO PTHR12352
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3895
SonicParanoid 1 1.000 - - X2872
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.740

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