DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and nid2b

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_021324205.1 Gene:nid2b / 570436 ZFINID:ZDB-GENE-040724-143 Length:1166 Species:Danio rerio


Alignment Length:594 Identity:122/594 - (20%)
Similarity:188/594 - (31%) Gaps:201/594 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ACAAKQG--ECD-----DNEGPVCGTDGQTYPTRCHLLR-----------AQCGGHQVSLKYSGS 76
            :|:..||  .|.     ..:|.:|      .|.|..|.:           ..|..|:.||:.|.|
Zfish   689 SCSNTQGSFRCQCWPEYKGDGFLC------QPPRFSLKKNSAAKRPKPSLTACQQHRNSLQESMS 747

  Fly    77 CNACLEAVKFARRQQERDPGYFVPRCRKDGNFAAMQCYGNNG-CWCSDSQGRPIADDNKQFRRKG 140
            ....|||              |||:|...|.:..:||.|:.| |||.||:|:             
Zfish   748 MYPALEA--------------FVPKCDDKGQYKPLQCLGSTGHCWCVDSRGQ------------- 785

  Fly   141 KLRCRANRRDRRRLASHQIGYNPDTSASKGSSEAGSTAHRTCSKSDR---------SQFNTNLMR 196
                            .::|    |....|      |||..|.:...         .::...||.
Zfish   786 ----------------ERVG----TRTMPG------TAHANCDQPAALVPRVETVCERWRLALMS 824

  Fly   197 MFRNEAQSFFRQPSLSDSHILEWQFSKLDTNGNK----LLDRQEIRELKKVLRRNVKPRRCGRTF 257
            .:..:..|....| |.|:|   ..|..:...||.    .:||..:..:......:|||.      
Zfish   825 HYNGQPSSQDYMP-LCDAH---GNFQPVQCYGNSAFCWCVDRHGVEIIGTRSNEDVKPP------ 879

  Fly   258 GKYCDVTKDA---NLNWLEWSVCF-----------------------TKEFHNRSAVVNLLASSA 296
               | ::.||   | |.|.:.|..                       |.....:|.|:..|..|.
Zfish   880 ---C-ISGDAAPLN-NALMYPVISSSPSGPAILYTQASQIGVIPLEETDPVQEKSTVLLALQDSV 939

  Fly   297 ATAPPHSTHYSIHNTNVNGHHRGHTNTIGTGVNPHS-YSED-------ASGSEEHEDNYEDSATG 353
            .....:....:|......|.|..:...:.:|..|.: .|:|       |..|......:.||   
Zfish   940 VIGIDYDCQENILYWTDFGRHTIYRAVLISGSEPEAVISKDLIQPEGIAVDSVHRMLFWADS--- 1001

  Fly   354 YGGEEDDSQGADLPSSRTHIPSLYMLNSKPETASQDLENDSNCWMD--------QSVTLEEQGHG 410
             |.::.::.|.|....|..|.| .::|  |.....|.::.:..|.|        :|.:||  |..
Zfish  1002 -GKDKIETSGLDGSKRRVLIDS-GLVN--PRAIIVDAKSGTVFWTDWNRDAPKIESSSLE--GRN 1060

  Fly   411 GKSVLFVPQCLPDGRYQRIQCYSSTSTSYCWCVNEDTGKSIPGTSVKNKRPQCDESVAVRPMKGC 475
            .|.::.|...||:.     ..:.:.:...||.   |.|         .|:.:            |
Zfish  1061 RKVLVQVGLMLPNA-----LTWDNATNQLCWA---DAG---------TKKLE------------C 1096

  Fly   476 TEPRKTQFLKELKAYLNTSLLPSSTTGSNSSMWKTDDERIATLSFVYLDKNKNKSWDRREWKNFR 540
            ..|..||    .:.:.:|...|.|....|...:.||.||...|   .:|::..|:.|.       
Zfish  1097 ISPDGTQ----RRVFQDTLNYPFSLAIHNKHFYYTDWERDGIL---VIDQSTGKNTDY------- 1147

  Fly   541 DLVTSASHL 549
             |....|||
Zfish  1148 -LPIQQSHL 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 11/54 (20%)
TY 88..139 CDD:238114 15/51 (29%)
SPARC_Ca_bdg 180..274 CDD:287550 22/109 (20%)
SPARC_EC <219..281 CDD:238155 16/91 (18%)
TY 396..463 CDD:238114 15/74 (20%)
nid2bXP_021324205.1 NIDO 97..254 CDD:322035
nidG2 359..581 CDD:238158
EGF_3 594..630 CDD:315598
EGF_CA 632..665 CDD:214542
cEGF 655..678 CDD:315355
EGF_3 684..712 CDD:315598 5/22 (23%)
Thyroglobulin_1 735..798 CDD:306570 28/115 (24%)
TY 815..880 CDD:238114 15/77 (19%)
LY 931..965 CDD:214531 6/33 (18%)
LY 974..1016 CDD:214531 9/45 (20%)
LY 1017..1061 CDD:214531 12/48 (25%)
LY 1062..1104 CDD:214531 13/74 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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