DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment magu and agrn

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_021325504.1 Gene:agrn / 565373 ZFINID:ZDB-GENE-030131-1033 Length:2056 Species:Danio rerio


Alignment Length:528 Identity:100/528 - (18%)
Similarity:160/528 - (30%) Gaps:177/528 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CAAKQGECDDNEGPVCGTDGQTYPTRCHLLRAQCGGHQ-VSLKYSGSCNACLEAVKFARRQQERD 94
            |:....:||....|:||.||:|||..|.....:|...: :.:|..|.|:..||:           
Zfish   418 CSCDPIQCDGTYKPLCGKDGKTYPNDCERKLQECRTQKDIPVKQQGPCDLNLES----------- 471

  Fly    95 PGYFVPRCRKDGNFAAMQCYGNNG---CWCSDS----QGRPIADDNKQFRRKGKLRCRANRRDRR 152
                 |..:|...|.|: |...|.   |.|||:    |......|...:....:::.......::
Zfish   472 -----PCLKKTCEFGAV-CVVKNSEAVCECSDACPQDQDPVCGSDGHTYSSSCQMKAMGCALQKQ 530

  Fly   153 RLASHQIGYNPD---TSASKGSSEAGSTAHRTCSK-----------SDRSQFNTNLMRMFRNEAQ 203
            ....|: |...|   |:.|.|:.....|....|.|           ||.:.::...    :...|
Zfish   531 IQMQHK-GPCADESCTNCSFGAICDAQTGRCVCPKGCLETRQPVCGSDGTTYDNEC----KLNVQ 590

  Fly   204 SFFRQPSLS----------DSHILEWQFSKLDTNGNKLLDRQEIRELKKVLRRNVKPRRC---GR 255
            :..:|..|.          .|.:..|        |::.::.:  .|.::...:.||| .|   |.
Zfish   591 ACTKQLDLKVVAHGECKTCGSTVCSW--------GSQCVNNK--CECQQCTGQPVKP-VCGSDGN 644

  Fly   256 TFGKYCDV-----TKDANLNWLEWSVCFTKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNG 315
            |:...|::     .|...:...:..||                                      
Zfish   645 TYNNDCELRLASCQKQRKIEVAKPGVC-------------------------------------- 671

  Fly   316 HHRGHTNTIGTGVNPHSYSEDASGSEEHEDNYEDSATGYGGEEDDSQGADLPSSR---------- 370
                 ....|:|       ...||||..|   :|....|||..||    |:...|          
Zfish   672 -----DEDCGSG-------GSGSGSETCE---QDRCRRYGGTWDD----DMEDERCVCELNCQIV 717

  Fly   371 THIPSLYMLNSKPETASQDLE-NDSNCWMDQSVTLEEQGHGGKSVLFVPQ--------------- 419
            .|.|   :..|...|.|.|.| ..:.|  ::.:.|..|..|....:..|.               
Zfish   718 LHSP---VCGSDGNTYSSDCELKKTRC--EKQIDLSVQSQGPCPTIVSPPPELVASQHCSQTVYG 777

  Fly   420 CLPDGRYQRIQCYSSTSTSYCWCVNEDT--GKSIPGTSVKNKRP-----QCD---------ESVA 468
            |..|.:...:....:...|.|.|.:..:  |...|.|...:.:|     :||         ..:.
Zfish   778 CCEDNKTAALGVGLAGCPSMCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIV 842

  Fly   469 VRPMKGCT 476
            ...|.|||
Zfish   843 TENMSGCT 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 14/39 (36%)
TY 88..139 CDD:238114 12/57 (21%)
SPARC_Ca_bdg 180..274 CDD:287550 19/122 (16%)
SPARC_EC <219..281 CDD:238155 13/69 (19%)
TY 396..463 CDD:238114 14/88 (16%)
agrnXP_021325504.1 NtA 43..146 CDD:308653
KAZAL 200..246 CDD:197624
KAZAL 276..321 CDD:197624
KAZAL_FS 353..393 CDD:238052
KAZAL 422..465 CDD:197624 14/42 (33%)
KAZAL 494..539 CDD:197624 7/45 (16%)
KAZAL 561..606 CDD:197624 7/48 (15%)
KAZAL 626..671 CDD:197624 9/45 (20%)
KAZAL 709..755 CDD:197624 11/50 (22%)
Laminin_EGF 798..840 CDD:278482 8/41 (20%)
Laminin_EGF 852..>888 CDD:278482
KAZAL 932..974 CDD:197624
SEA 1145..1228 CDD:307516
EGF 1328..1356 CDD:306513
LamG 1369..1519 CDD:238058
Laminin_G_1 1663..1794 CDD:278483
EGF_CA 1814..1845 CDD:238011
Laminin_G_1 1908..2039 CDD:278483
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.