DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment magu and Igfbp4

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001004274.1 Gene:Igfbp4 / 360622 RGDID:2875 Length:254 Species:Rattus norvegicus


Alignment Length:95 Identity:25/95 - (26%)
Similarity:35/95 - (36%) Gaps:24/95 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GSCNACLEAV--KFARRQQERDPGYF---VPRCRKDGNFAAMQCY----GNNG-CWCSDSQGRPI 129
            |||.:.|...  :.|..|.......|   :|.|.::|||...||:    |..| |||.|      
  Rat   168 GS
CQSELHRALERLAASQSRTHEDLFIIPIPNCDRNGNFHPKQCHPALDGQRGKCWCVD------ 226

  Fly   130 ADDNKQFRRKGKLRCRANRRDRRRLASHQI 159
                    ||..::.......:..|..||:
  Rat   227 --------RKTGVKLPGGLEPKGELDCHQL 248

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 1/1 (100%)
TY 88..139 CDD:238114 15/58 (26%)
SPARC_Ca_bdg 180..274 CDD:287550
SPARC_EC <219..281 CDD:238155
TY 396..463 CDD:238114
Igfbp4NP_001004274.1 IB 25..101 CDD:197525