DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and smoc2

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_017214340.2 Gene:smoc2 / 266988 ZFINID:ZDB-GENE-021031-5 Length:502 Species:Danio rerio


Alignment Length:597 Identity:143/597 - (23%)
Similarity:220/597 - (36%) Gaps:230/597 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ECD-DNEG----PVCGTDGQTYPTRCHLLRAQCGGHQVSLKYSGSCN---ACLEAVKFARRQQER 93
            ||: |..|    |:|.:||:|:.:||..|||:|...|:::. .|.|.   .|:...|:..:|.::
Zfish   106 ECNTDCSGAPRKPLCASDGRTFSSRCEFLRAKCRDPQLAVS-RGQCKDTPKCVAEKKYTEQQAKK 169

  Fly    94 -DPGYFVPRCRKDGNFAAMQCYGNNG-CWCSDSQGRPIADD---NKQFRRKGKLRCRANRRDRRR 153
             .|..|||.|..||.::.:||:...| |||....||||:..   ||      |.:|:.::..:  
Zfish   170 LFPQVFVPVCNPDGTYSEVQCHSYTGYCWCVMPNGRPISGSAVANK------KPQCQGSKNSK-- 226

  Fly   154 LASHQIGYNPDTSASKGSSEAGSTAHRTCSKSDRSQFNTNLMRMFRNEAQSFFRQPSLSDSHILE 218
                   .||        .|.|        |||.|   |.|:      .:|   |||:.:..|:.
Zfish   227 -------VNP--------KEPG--------KSDPS---TVLV------VES---QPSVDEEDIIS 256

  Fly   219 WQFSKLDTNGNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKYCDVTKDANLNWLEWSVCFTKEFH 283
             |:..|                                                 ||    ::..
Zfish   257 -QYPTL-------------------------------------------------WS----EQVR 267

  Fly   284 NRSAVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTGVNPHSYSEDASGSEEHEDNYE 348
            :|                                :..|.|..|..:    .|..|..||      
Zfish   268 SR--------------------------------QNRTRTQSTSCD----QEQLSAQEE------ 290

  Fly   349 DSATGYGGEEDDSQGADLPSSRTHIPSLYMLNSKPETASQDLENDSNCWMDQSVTLEEQGHGGKS 413
                                :|.|                  :|::                   
Zfish   291 --------------------ARQH------------------KNEA------------------- 298

  Fly   414 VLFVPQCLPDGRYQRIQCYSSTSTSYCWCVNEDTGKSIPGTSVKNKRPQCDESVAVRP------- 471
             :|||.|...|.|:.:||:  .||.|||||..|||:.|||||.::::|:||.:....|       
Zfish   299 -VFVPDCASGGLYKPVQCH--PSTGYCWCVLVDTGRPIPGTSTRHEQPKCDGNARAHPNKPKDHY 360

  Fly   472 ----MKGCTEPRKTQFLKELKAYLNTSLLPSST-TGSNSSMWKTD-----DERIATLSFVYLDKN 526
                ::||...:||:||..:...|:|.::.:.| ..:...|.:.|     :||:....|..||||
Zfish   361 RSRHLQGCPGEKKTEFLTSVLDALSTDMVHAVTDPAAGGRMLEPDPSHTLEERVVHWYFSQLDKN 425

  Fly   527 KNKSWDRREWKNFRDLVTSASHLRRCGKKMPRYCDVNGDKKISLAEWLNCLQATPRESATTAKPA 591
            .:....::|.|.|:.|:...|..::|.||...|||::.||.:||.|.:.||..|..|.|.|....
Zfish   426 SSGDIGKKEIKPFKRLLRKKSKPKKCVKKFVEYCDISNDKALSLQELMGCLGVTKEEGAKTGDGT 490

  Fly   592 QSNETASPKFQG 603
            .|::....|.||
Zfish   491 TSSKLNLSKKQG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 16/43 (37%)
TY 88..139 CDD:238114 20/55 (36%)
SPARC_Ca_bdg 180..274 CDD:287550 13/93 (14%)
SPARC_EC <219..281 CDD:238155 4/61 (7%)
TY 396..463 CDD:238114 24/66 (36%)
smoc2XP_017214340.2 KAZAL_FS 111..150 CDD:238052 14/39 (36%)
TY 155..219 CDD:238114 23/69 (33%)
Thyroglob_assoc 220..276 CDD:318740 21/178 (12%)
TY 279..345 CDD:238114 31/135 (23%)
EFh_SPARC_SMOC2 368..480 CDD:320020 35/111 (32%)
EF-hand motif 411..443 CDD:320020 11/31 (35%)
EF-hand motif 448..480 CDD:320020 13/31 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10234
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3791
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1057719at2759
OrthoFinder 1 1.000 - - FOG0004129
OrthoInspector 1 1.000 - - otm25565
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12352
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3895
SonicParanoid 1 1.000 - - X2872
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.100

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