DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and Nid2

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_032721.2 Gene:Nid2 / 18074 MGIID:1298229 Length:1403 Species:Mus musculus


Alignment Length:501 Identity:85/501 - (16%)
Similarity:118/501 - (23%) Gaps:269/501 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ARCV------LFVTWLAVFIATGKSDDQLMKLPACAAKQGECDDNEGPVCGTDGQTYPTRCHLLR 61
            |||:      .....|..||.||   .|...:..||  :..|  :|..:|.....::..||....
Mouse   888 ARCIHHGGSSFSCACLPGFIGTG---HQCSDVDECA--ENRC--HEAAICYNTPGSFSCRCQPGY 945

  Fly    62 AQCGGHQVSLKYSGSCNACLEAVKFARRQQERDPGY-----FVPRCRKDGNFAAMQCYGNNG-CW 120
            ...|.|..|........:.|:..::.:|..:....|     .:|:|...|||..:||:|:.| ||
Mouse   946 RGDGFHCTSDTVPEDSISGLKPCEYQQRYAQTQHAYPGSRIHIPQCDDQGNFVPLQCHGSTGFCW 1010

  Fly   121 CSDSQGRPIADDNKQFRRKGKLRCRANRRDRRRLASHQIGYNPDTSASKGSSEAGSTAHRTCSKS 185
            |.|..|                              |::   |.|....||:             
Mouse  1011 CVDRNG------------------------------HEV---PGTQTPPGST------------- 1029

  Fly   186 DRSQFNTNLMRMFRNEAQSFFRQPSLSDSHILEWQFSKLDTNGNKLLDRQEIRELKKVLRRNVKP 250
                                                                            |
Mouse  1030 ----------------------------------------------------------------P 1030

  Fly   251 RRCGRTFGKYCDVTKDANLNWLEWSVCFTKEFHNRSAVVNLLASSAATAPPHSTHYSIHNTNVNG 315
            ..||                                            .||..|.          
Mouse  1031 PHCG--------------------------------------------PPPEPTQ---------- 1041

  Fly   316 HHRGHTNTIGTGVNPHSYSEDASGS-EEHEDNYEDSATGYGGEEDDSQGADLPSSRTHIPSLYML 379
                         .|.:..|....| .||          |||...|.|                 
Mouse  1042 -------------RPRTVCERWRESLLEH----------YGGTPRDDQ----------------- 1066

  Fly   380 NSKPETASQDLENDSNCWMDQSVTLEEQGHGGKSVLFVPQCLPDGRYQRIQCYSSTSTSYCWCVN 444
                                                :||||...|.:..:||:.  .:.:||||:
Mouse  1067 ------------------------------------YVPQCDDLGHFIPLQCHG--KSDFCWCVD 1093

  Fly   445 EDTGKSIPGT-SVKNKRPQCDESVA---VR--PMKGCTEPRKTQFL 484
            :| |:.:.|| |....||.|..:||   ||  |....|.|....||
Mouse  1094 KD-GRELQGTRSQPGTRPACIPTVAPPVVRPTPRPDVTPPSVGTFL 1138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 8/38 (21%)
TY 88..139 CDD:238114 16/56 (29%)
SPARC_Ca_bdg 180..274 CDD:287550 3/93 (3%)
SPARC_EC <219..281 CDD:238155 3/61 (5%)
TY 396..463 CDD:238114 18/67 (27%)
Nid2NP_032721.2 NIDO 108..275 CDD:214712
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..403
EGF_3 511..546 CDD:289699
nidG2 548..780 CDD:294123
EGF_3 786..822 CDD:289699
EGF_CA 824..865 CDD:284955
EGF_3 875..913 CDD:289699 8/27 (30%)
EGF_3 919..952 CDD:289699 8/36 (22%)
Cell attachment site 946..948 0/1 (0%)
TY 967..1028 CDD:238114 19/93 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1021..1043 9/165 (5%)
TY 1047..1112 CDD:238114 27/130 (21%)
LY 1162..1200 CDD:214531
LDL-receptor class B 1 1182..1225
LY 1206..1248 CDD:214531
LDL-receptor class B 2 1226..1268
LY 1249..1293 CDD:214531
LDL-receptor class B 3 1269..1313
LY 1294..1336 CDD:214531
LDL-receptor class B 4 1314..1355
LDL-receptor class B 5 1357..1401
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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