DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment magu and Sparcl1

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001345943.1 Gene:Sparcl1 / 13602 MGIID:108110 Length:650 Species:Mus musculus


Alignment Length:278 Identity:68/278 - (24%)
Similarity:96/278 - (34%) Gaps:90/278 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KSDDQLMKLPACAAKQGECDDNE--------GPVCGTDGQTYPTRCHLLRAQC------GGHQVS 70
            |:|.|  ..|.|.     |.|.|        ...||||.|||.:.|||...:|      .|||:.
Mouse   431 KTDPQ--GKPHCV-----CQDPETCPPAKILDQACGTDNQTYASSCHLFATKCRLEGTKKGHQLQ 488

  Fly    71 LKYSGSCNACLEAVKFARRQQERDPGYFVPRCRKDGNFAAMQCYGNN---GCWCSDSQGRPIADD 132
            |.|.|:|.:......|...|       |..|.|.......||.|..|   |.:.::.|       
Mouse   489 LDYFGACKSIPACTDFEVAQ-------FPLRMRDWLKNILMQLYEPNPKHGGYLNEKQ------- 539

  Fly   133 NKQFRRKGKLRCRANRRDRRRLA-SHQIGYNPDTSASKGSSEAGSTAHRTCSKSDRSQFNTNLMR 196
                |.|.|   :....::|.|| .|.|..                                |:|
Mouse   540 ----RSKVK---KIYLDEKRLLAGDHPIEL--------------------------------LLR 565

  Fly   197 MFRNEAQSFFRQPSLSDSHILEWQFSKLDTN-GNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKY 260
            .|:.....:.        :.:.|||::||.: .:::|...|:..|:..|   |....|...|.:.
Mouse   566 DFKKNYHMYV--------YPVHWQFNELDQHPADRILTHSELAPLRASL---VPMEHCITRFFEE 619

  Fly   261 CDVTKDANLNWLEWSVCF 278
            ||..||.::...||..||
Mouse   620 CDPNKDKHITLKEWGHCF 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 20/52 (38%)
TY 88..139 CDD:238114 11/53 (21%)
SPARC_Ca_bdg 180..274 CDD:287550 19/94 (20%)
SPARC_EC <219..281 CDD:238155 20/61 (33%)
TY 396..463 CDD:238114
Sparcl1NP_001345943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..352
MDN1 <60..317 CDD:227596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..415
KAZAL_FS 419..498 CDD:412159 26/73 (36%)
EFh_SPARC_like 501..641 CDD:320010 42/201 (21%)
EF-hand motif 574..606 CDD:320010 8/39 (21%)
EF-hand motif 609..639 CDD:320010 10/29 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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