DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment magu and Agrn

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_006538554.1 Gene:Agrn / 11603 MGIID:87961 Length:2057 Species:Mus musculus


Alignment Length:536 Identity:113/536 - (21%)
Similarity:171/536 - (31%) Gaps:201/536 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TGKSDDQLMKLPACAAKQGECDDN----------------EGPVCGTDGQTYPTRCHLLRAQCGG 66
            :|..:|...:...|....|..|::                :.||||:||.||.|.|||.:|:|..
Mouse   676 SGSGEDNACEQELCRQHGGVWDEDSEDGPCVCDFSCQSVLKSPVCGSDGVTYSTECHLKKARCEA 740

  Fly    67 HQ-------------------------------------------VSL-------------KYSG 75
            .|                                           |.|             .|||
Mouse   741 RQELYVAAQGACRGPTLAPLLPMASPHCAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSYSG 805

  Fly    76 SCN------ACLEAVKFARRQQERDPGYFVPRCRKDGNFAAMQCYGNNGCW-CSDSQGRPIADDN 133
            :|:      :|...|. ..|....:||::        ||..:...|::||. ||......:.||.
Mouse   806 TCDPVTGQCSCRPGVG-GLRCDRCEPGFW--------NFRGIVTDGHSGCTPCSCDPRGAVRDDC 861

  Fly   134 KQFRRKGKLRCRANRRDRRRLASHQIGYNPDTSA-SKGSSEAGSTAHRTCSKSDRSQFNTNLMRM 197
            :|.  .|...||..      :|..:.|..||..| .....||..|...||.:. ..:|..:.:. 
Mouse   862 EQM--TGLCSCRPG------VAGPKCGQCPDGQALGHLGCEADPTTPVTCVEM-HCEFGASCVE- 916

  Fly   198 FRNEAQSFFRQ---PSLSDSHILEWQFSKLDTNGNKLLDRQEIRELKKVLRRNVKPRRCGR---T 256
                 ::.|.|   |:|:..          :.|..|:                     ||.   |
Mouse   917 -----EAGFAQCVCPTLTCP----------EANSTKV---------------------CGSDGVT 945

  Fly   257 FGKYCDVTKDANLNWLEWSV-----CFTKEFHNRSAVVNLLA--SSAATAPPH-------STHYS 307
            :|..|.:...|....|:.|:     |       |.:|...::  |::.|.|.|       |.|.|
Mouse   946 YGNECQLKTIACRQRLDISIQSLGPC-------RESVAPGVSPTSASMTTPRHILSRTLASPHSS 1003

  Fly   308 I--------HN---------TNVNGHHRGHTNT------IGTGVNPHSYSEDASGSEEHEDNYED 349
            :        |:         ..|.|..|....|      :.|.:...|.|.:.||.||...:.|.
Mouse  1004 LPLSPSTTAHDWPTPLPTSPQTVVGTPRSTAATPSDVASLATAIFRESGSTNGSGDEELSGDEEA 1068

  Fly   350 SATGYGGEEDDSQGADLPSSRTHIPSLYMLN---------SKPETASQDLENDSNCWMDQSV--T 403
            |..|.||.|.......:    ||.|.:...:         |..:|.|.|.|. |||...::.  .
Mouse  1069 SGGGSGGLEPPVGSVVV----THGPPIERASCYNSPLGCCSDGKTPSLDSEG-SNCPATKAFQGV 1128

  Fly   404 LEEQGHGGKSVLFVPQ 419
            ||.:|..|:.:.:.|:
Mouse  1129 LELEGVEGQELFYTPE 1144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 21/110 (19%)
TY 88..139 CDD:238114 13/51 (25%)
SPARC_Ca_bdg 180..274 CDD:287550 16/99 (16%)
SPARC_EC <219..281 CDD:238155 11/69 (16%)
TY 396..463 CDD:238114 6/26 (23%)
AgrnXP_006538554.1 NtA 46..148 CDD:367356
KAZAL 198..244 CDD:197624
KAZAL 274..319 CDD:197624
Kazal_1 351..391 CDD:333798
KAZAL_FS 423..463 CDD:238052
KAZAL 491..536 CDD:197624
KAZAL 556..601 CDD:197624
KAZAL 621..666 CDD:197624
KAZAL 706..752 CDD:197624 15/45 (33%)
EGF_Lam 795..835 CDD:238012 9/48 (19%)
Laminin_EGF 849..>885 CDD:365839 11/43 (26%)
KAZAL 924..971 CDD:197624 12/77 (16%)
SEA 1121..1245 CDD:214554 5/24 (21%)
EGF 1322..1352 CDD:333761
Laminin_G_1 1389..1520 CDD:333802
Laminin_G_1 1657..1792 CDD:333802
EGF_CA 1814..1846 CDD:238011
Laminin_G_1 1910..2040 CDD:333802
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.