DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and sparcl2

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_017207307.1 Gene:sparcl2 / 100534809 ZFINID:ZDB-GENE-131127-575 Length:259 Species:Danio rerio


Alignment Length:217 Identity:56/217 - (25%)
Similarity:85/217 - (39%) Gaps:48/217 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 PDGRYQRIQCYSSTSTSYCWCVNED---TGKSI-PGTSVKNKRPQCD------------ESVAVR 470
            |:...|.::|:|... |:|..|.|:   |.|.: |.|..:.:.|.|.            ...|.|
Zfish    44 PESLCQLLKCHSPIG-SWCQVVKEEGVLTPKCVCPSTCPRQRAPVCSVLGKTYSNECLLHKEACR 107

  Fly   471 PMK---------------GCTEPRKTQFLKELKAYLNTSLLPS-------STTGSNSSMWKTDDE 513
            ..:               ||:|....||...|   |:..||.|       ....|.|.:..|...
Zfish   108 KERRIGKAHNGACLVSETGCSEEEFGQFPYRL---LDWFLLLSRMGERYTPAAPSQSCLSHTQRM 169

  Fly   514 RIATLSFVYLDKNKNKSWDRREWKNFRDLVTSASHLRRCGKKMPRYCDVNGDKKISLAEWLNCLQ 578
            ::|...||.||:|::....||:   .|.|......|..|.::..:.||.|.:||::|.||.:|| 
Zfish   170 QLAQRRFVLLDRNRDGKLSRRD---LRKLHYKRMPLEHCAQRFFQSCDKNQNKKVTLREWTSCL- 230

  Fly   579 ATPRESATTAKPAQSNETASPK 600
              .:.|....:...|.:..|||
Zfish   231 --VKRSERWFEDFMSMKMGSPK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052
TY 88..139 CDD:238114
SPARC_Ca_bdg 180..274 CDD:287550
SPARC_EC <219..281 CDD:238155
TY 396..463 CDD:238114 13/44 (30%)
sparcl2XP_017207307.1 KAZAL 75..120 CDD:197624 6/44 (14%)
SPARC_EC 127..232 CDD:238155 34/113 (30%)
SPARC_Ca_bdg 127..226 CDD:287550 30/104 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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