DRSC/TRiP Functional Genomics Resources

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Protein Alignment magu and smoc1

DIOPT Version :9

Sequence 1:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_012823493.1 Gene:smoc1 / 100145733 XenbaseID:XB-GENE-989094 Length:491 Species:Xenopus tropicalis


Alignment Length:666 Identity:147/666 - (22%)
Similarity:232/666 - (34%) Gaps:241/666 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLARCV-LFVTWLAVFIATGKSDDQLMKLPACAAKQG--------------ECDDN-----EGPV 45
            |:.|.: ||||...|          |:.||.|..::.              :|:.:     ..||
 Frog     1 MIPRVIALFVTCHFV----------LLHLPQCCGQRATGPRFLISDRDRDPQCNPHCTRPQHKPV 55

  Fly    46 CGTDGQTYPTRCHLLRAQCGGHQVSLKYSGSC-----NAC----LEAVKFARRQQERDPGYFVPR 101
            |.:||:||.:.|...||:|....:|:.:.|.|     :.|    .:|::.|::.||   ..|:|.
 Frog    56 CASDGRTYESMCDYQRAKCKDATLSVTHRGRCKDAGQSKCRLERTQALEQAKKPQE---AVFIPE 117

  Fly   102 CRKDGNFAAMQCYGNNG-CWCSDSQGRPIADDNKQFRRKGKLRCRANRRDRRRLASHQIGYNPDT 165
            |.:||:|..:||:...| |||....|:|::                                   
 Frog   118 CNEDGSFTQVQCHTFTGYCWCVTPDGKPVS----------------------------------- 147

  Fly   166 SASKGSSEAGSTAHRTCSKS----DRSQFNTNLMRMFR-----NEAQSFFRQPSLSDSHILEWQF 221
                |||....|.  .||.|    ..||.|:.....||     |........|::...|:.|.. 
 Frog   148 ----GSSVQNKTP--VCSGSVTEKPSSQGNSGRRVSFRFFLTLNSDDGSKPTPTVESRHVFEGD- 205

  Fly   222 SKLDTNGNKLLDRQEIRELKKVLRRNVKPRRCGRTFGKYCDVTKDANLNWLEWSVCFTKEFHNRS 286
               ...|...:.|.||:..... .:||.        |...|:|  |...|::             
 Frog   206 ---GRRGPHPILRGEIQSSDHP-SQNVG--------GGVIDIT--APTLWIK------------- 243

  Fly   287 AVVNLLASSAATAPPHSTHYSIHNTNVNGHHRGHTNTIGTGVNPHSYSEDASGSEEHEDNYEDSA 351
                              |..|.:..:|                       |.|.:|..|     
 Frog   244 ------------------HLVIKDAKLN-----------------------SSSVKHPAN----- 262

  Fly   352 TGYGGEEDDSQGADLPSSRTHIPSLYMLNSKPETASQDLENDSNCWMDQSVTLEEQGHGGKSVLF 416
                                                       :|..::...|||.....:..:.
 Frog   263 -------------------------------------------SCDQERQSALEEAKLNPRDGIV 284

  Fly   417 VPQCLPDGRYQRIQCYSSTSTSYCWCVNEDTGKSIPGTSVKNKRPQCDESV------AVRPMK-- 473
            :|:|.|.|.|:.:||:.  ||.|||||..|||:.:||||.:.:.|.|:...      |..|.|  
 Frog   285 IPECAPGGLYKPVQCHQ--STGYCWCVLVDTGRPLPGTSTRYETPVCESDARWKNTDAEDPFKDR 347

  Fly   474 ---GCTEPRKTQFLKELKAYLNTSLLPSSTTGSNSSMWK--------TDDERIATLSFVYLDKNK 527
               ||.|.:|.:|:..|...|.|.::.:..:.:.::..:        |.:||:....|..||.|.
 Frog   348 ELAGCPEGKKLEFITSLLDALTTDMVQAINSAAPAAGGRFSEPDPNHTLEERVVLWYFSQLDSNG 412

  Fly   528 NKSWDRREWKNFRDLVTSASHLRRCGKKMPRYCDVNGDKKISLAEWLNCL--QATPRESATTAKP 590
            ::..:::|.|.|:..|...:..::|.::...|||:|.||.||..|...||  :..|..:|.:..|
 Frog   413 SEDINKKEMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKSISFPELKGCLGVRKEPGANAGSFPP 477

  Fly   591 AQSNETASPKFQGVNP 606
            .        |..|.||
 Frog   478 G--------KRPGSNP 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 14/43 (33%)
TY 88..139 CDD:238114 16/51 (31%)
SPARC_Ca_bdg 180..274 CDD:287550 23/102 (23%)
SPARC_EC <219..281 CDD:238155 11/61 (18%)
TY 396..463 CDD:238114 26/66 (39%)
smoc1XP_012823493.1 KAZAL_FS 47..87 CDD:238052 13/39 (33%)
Thyroglobulin_1 95..158 CDD:278514 23/106 (22%)
Thyroglob_assoc 159..256 CDD:293205 26/165 (16%)
TY 263..329 CDD:238114 26/67 (39%)
SPARC_EC <401..468 CDD:238155 20/66 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10380
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 177 1.000 Inparanoid score I3926
OMA 1 1.010 - - QHG47194
OrthoDB 1 1.010 - - D1057719at2759
OrthoFinder 1 1.000 - - FOG0004129
OrthoInspector 1 1.000 - - oto105578
Panther 1 1.100 - - LDO PTHR12352
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2872
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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